RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 NOX5Q96PH1 765 aa15.71■□□□□ 0.1
ERCC3-203ENST00000445889 LSM14BQ9BX40 385 aaKnown RBP15.71■□□□□ 0.1
ERCC3-203ENST00000445889 PLCH1Q4KWH8 1693 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 GOLGA8KD6RF30 607 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 EDIL3O43854 480 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 OPA1O60313 960 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 ACTN1P12814 892 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 KRT25Q7Z3Z0 450 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 ARAP2Q8WZ64 1704 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 A0A087X0T9 212 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 MARCH6O60337 910 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 FAM228BP0C875 321 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 IBSPP21815 317 aaPredicted RBP15.7■□□□□ 0.1
ERCC3-203ENST00000445889 CDK8P49336 464 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 KIAA0753Q2KHM9 967 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 FAM83BQ5T0W9 1011 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 PDXDC1Q6P996 788 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 LRRC55Q6ZSA7 311 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 AK8Q96MA6 479 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 ANKRD36CQ5JPF3 1778 aa15.7■□□□□ 0.1
ERCC3-203ENST00000445889 CDK17Q00537 523 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 CFAP58Q5T655 872 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 LAD1O00515 517 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 NOL4O94818 638 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 INPP5BP32019 993 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 SLC16A2P36021 539 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 IRX3P78415 501 aaPredicted RBP15.69■□□□□ 0.1
ERCC3-203ENST00000445889 HLTFQ14527 1009 aaKnown RBP eCLIP15.69■□□□□ 0.12e-6■■■■□ 23.7
ERCC3-203ENST00000445889 ASTE1Q2TB18 679 aaPredicted RBP15.69■□□□□ 0.1
ERCC3-203ENST00000445889 CFAP221Q4G0U5 840 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 FIGNQ5HY92 759 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 FAM182BQ5T319 152 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 UNC13DQ70J99 1090 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 AMIGO3Q86WK7 504 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 DAGLBQ8NCG7 672 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 CASKIN2Q8WXE0 1202 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 SH3GL2Q99962 352 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 AP1M1Q9BXS5 423 aa15.69■□□□□ 0.1
ERCC3-203ENST00000445889 E9PMD0 336 aa15.68■□□□□ 0.1
ERCC3-203ENST00000445889 GNA11P29992 359 aa15.68■□□□□ 0.1
ERCC3-203ENST00000445889 HNRNPH3P31942 346 aaKnown RBP15.68■□□□□ 0.1
ERCC3-203ENST00000445889 MAATS1Q7Z4T9 603 aa15.68■□□□□ 0.1
ERCC3-203ENST00000445889 CCDC84Q86UT8 332 aaPredicted RBP15.68■□□□□ 0.1
ERCC3-203ENST00000445889 SETDB2Q96T68 719 aa15.68■□□□□ 0.1
ERCC3-203ENST00000445889 MYO1FO00160 1098 aa15.68■□□□□ 0.1
ERCC3-203ENST00000445889 MNAT1P51948 309 aa15.68■□□□□ 0.1
ERCC3-203ENST00000445889 PICALMQ13492 652 aa15.68■□□□□ 0.1
ERCC3-203ENST00000445889 CUEDC2Q9H467 287 aa15.68■□□□□ 0.1
ERCC3-203ENST00000445889 BCCIPQ9P287 314 aaKnown RBP eCLIP15.68■□□□□ 0.1
ERCC3-203ENST00000445889 MYH14Q7Z406 1995 aaKnown RBP15.68■□□□□ 0.1
ERCC3-203ENST00000445889 SFMBT2Q5VUG0 894 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 EMBQ6PCB8 327 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 GPATCH11Q8N954 259 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 BCAS3Q9H6U6 928 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 CAPN7Q9Y6W3 813 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 RAD51CO43502 376 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 BTDP43251 543 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 SLC9C1Q4G0N8 1177 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 TTBK2Q6IQ55 1244 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 MMS22LQ6ZRQ5 1243 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 MTMR9Q96QG7 549 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 H0YHG0 523 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 KCNK3O14649 394 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 GUCY2CP25092 1073 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 KRT79Q5XKE5 535 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 PIK3R5Q8WYR1 880 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 RAD54LQ92698 747 aa15.67■□□□□ 0.1
ERCC3-203ENST00000445889 PPANQ9NQ55 473 aaKnown RBP15.67■□□□□ 0.1
ERCC3-203ENST00000445889 COASYQ13057 564 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 CEP85LQ5SZL2 805 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 RNF187Q5TA31 235 aaPredicted RBP15.66■□□□□ 0.1
ERCC3-203ENST00000445889 GALNT17Q6IS24 598 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 GBP6Q6ZN66 633 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 IFT20Q8IY31 132 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 MYOCDQ8IZQ8 938 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 GUF1Q8N442 669 aaKnown RBP15.66■□□□□ 0.1
ERCC3-203ENST00000445889 F8W031 263 aaPredicted RBP15.66■□□□□ 0.1
ERCC3-203ENST00000445889 TULP1O00294 542 aaPredicted RBP15.66■□□□□ 0.1
ERCC3-203ENST00000445889 PRLRP16471 622 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 HNRNPH1P31943 449 aaKnown RBP15.66■□□□□ 0.1
ERCC3-203ENST00000445889 KLHL30Q0D2K2 578 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 ALS2CLQ60I27 953 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 TEX11Q8IYF3 940 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 IQCKQ8N0W5 287 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 PANK4Q9NVE7 773 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 NHSL1Q5SYE7 1610 aa15.66■□□□□ 0.1
ERCC3-203ENST00000445889 LCA5LO95447 670 aa15.65■□□□□ 0.1
ERCC3-203ENST00000445889 BAG3O95817 575 aa15.65■□□□□ 0.1
ERCC3-203ENST00000445889 CPP00450 1065 aa15.65■□□□□ 0.1
ERCC3-203ENST00000445889 STAT3P40763 770 aa15.65■□□□□ 0.1
ERCC3-203ENST00000445889 HERC4Q5GLZ8 1057 aaPredicted RBP15.65■□□□□ 0.1
ERCC3-203ENST00000445889 ANKS1AQ92625 1134 aa15.65■□□□□ 0.1
ERCC3-203ENST00000445889 KIAA1024Q9UPX6 916 aa15.65■□□□□ 0.1
ERCC3-203ENST00000445889 COL4A3BPQ9Y5P4 624 aa15.65■□□□□ 0.1
ERCC3-203ENST00000445889 SLC9A1P19634 815 aa15.65■□□□□ 0.1
ERCC3-203ENST00000445889 LSP1P33241 339 aa15.65■□□□□ 0.1
ERCC3-203ENST00000445889 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
ERCC3-203ENST00000445889 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.65■□□□□ 0.1
ERCC3-203ENST00000445889 TMEM266Q2M3C6 531 aa15.64■□□□□ 0.09
ERCC3-203ENST00000445889 OTUD6BQ8N6M0 293 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms