RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 PCNX4Q63HM2 1172 aa27.42■■□□□ 1.98
C9orf3-207ENST00000445181 XRRA1Q6P2D8 792 aa27.42■■□□□ 1.98
C9orf3-207ENST00000445181 KCNV1Q6PIU1 500 aa27.42■■□□□ 1.98
C9orf3-207ENST00000445181 GTF3C6Q969F1 213 aa27.42■■□□□ 1.98
C9orf3-207ENST00000445181 ZMYND12Q9H0C1 365 aa27.42■■□□□ 1.98
C9orf3-207ENST00000445181 RTEL1Q9NZ71 1219 aa27.42■■□□□ 1.98
C9orf3-207ENST00000445181 ESYT2A0FGR8 921 aa27.41■■□□□ 1.98
C9orf3-207ENST00000445181 ARVCFO00192 962 aa27.41■■□□□ 1.98
C9orf3-207ENST00000445181 RAG1P15918 1043 aa27.41■■□□□ 1.98
C9orf3-207ENST00000445181 ITGB8P26012 769 aa27.41■■□□□ 1.98
C9orf3-207ENST00000445181 GNA11P29992 359 aa27.41■■□□□ 1.98
C9orf3-207ENST00000445181 CPT1AP50416 773 aa27.41■■□□□ 1.98
C9orf3-207ENST00000445181 MRPS9P82933 396 aaKnown RBP27.41■■□□□ 1.98
C9orf3-207ENST00000445181 BRDTQ58F21 947 aaPredicted RBP27.41■■□□□ 1.98
C9orf3-207ENST00000445181 CCDC62Q6P9F0 684 aa27.41■■□□□ 1.98
C9orf3-207ENST00000445181 CXCL17Q6UXB2 119 aa27.41■■□□□ 1.98
C9orf3-207ENST00000445181 SH3GLB2Q9NR46 395 aa27.41■■□□□ 1.98
C9orf3-207ENST00000445181 LIMCH1Q9UPQ0 1083 aa27.41■■□□□ 1.98
C9orf3-207ENST00000445181 MROH7Q68CQ1 1323 aa27.41■■□□□ 1.98
C9orf3-207ENST00000445181 RGS20O76081 388 aa27.4■■□□□ 1.98
C9orf3-207ENST00000445181 GH1P01241 217 aa27.4■■□□□ 1.98
C9orf3-207ENST00000445181 AP3B2Q13367 1082 aa27.4■■□□□ 1.98
C9orf3-207ENST00000445181 BICD2Q8TD16 824 aa27.4■■□□□ 1.98
C9orf3-207ENST00000445181 PGBD1Q96JS3 809 aa27.4■■□□□ 1.98
C9orf3-207ENST00000445181 TMEM260Q9NX78 707 aa27.4■■□□□ 1.98
C9orf3-207ENST00000445181 DDX41Q9UJV9 622 aaKnown RBP27.4■■□□□ 1.98
C9orf3-207ENST00000445181 CABYRO75952 493 aa27.39■■□□□ 1.98
C9orf3-207ENST00000445181 NLRP5P59047 1200 aa27.39■■□□□ 1.98
C9orf3-207ENST00000445181 JAKMIP3Q5VZ66 844 aa27.39■■□□□ 1.98
C9orf3-207ENST00000445181 GPR153Q6NV75 609 aa27.39■■□□□ 1.98
C9orf3-207ENST00000445181 TBC1D32Q96NH3 1257 aa27.39■■□□□ 1.98
C9orf3-207ENST00000445181 ANO3Q9BYT9 981 aa27.39■■□□□ 1.98
C9orf3-207ENST00000445181 BACH2Q9BYV9 841 aa27.39■■□□□ 1.98
C9orf3-207ENST00000445181 SHHQ15465 462 aa27.38■■□□□ 1.97
C9orf3-207ENST00000445181 NLRX1Q86UT6 975 aa27.38■■□□□ 1.97
C9orf3-207ENST00000445181 REXO1Q8N1G1 1221 aaKnown RBP27.38■■□□□ 1.97
C9orf3-207ENST00000445181 STK36Q9NRP7 1315 aa27.38■■□□□ 1.97
C9orf3-207ENST00000445181 ST18O60284 1047 aa27.37■■□□□ 1.97
C9orf3-207ENST00000445181 DTNBO60941 627 aa27.37■■□□□ 1.97
C9orf3-207ENST00000445181 MYL3P08590 195 aa27.37■■□□□ 1.97
C9orf3-207ENST00000445181 TGFB3P10600 412 aa27.37■■□□□ 1.97
C9orf3-207ENST00000445181 CLK2P49760 499 aaKnown RBP27.37■■□□□ 1.97
C9orf3-207ENST00000445181 MCTP2Q6DN12 878 aa27.37■■□□□ 1.97
C9orf3-207ENST00000445181 DHX37Q8IY37 1157 aaKnown RBP27.37■■□□□ 1.97
C9orf3-207ENST00000445181 INPP4AQ96PE3 977 aaPredicted RBP27.37■■□□□ 1.97
C9orf3-207ENST00000445181 ORC3Q9UBD5 711 aaPredicted RBP27.37■■□□□ 1.97
C9orf3-207ENST00000445181 FIBPO43427 364 aa27.36■■□□□ 1.97
C9orf3-207ENST00000445181 SORBS3O60504 671 aa27.36■■□□□ 1.97
C9orf3-207ENST00000445181 CTDNEP1O95476 244 aa27.36■■□□□ 1.97
C9orf3-207ENST00000445181 ARHGAP1Q07960 439 aa27.36■■□□□ 1.97
C9orf3-207ENST00000445181 C9orf50Q5SZB4 431 aa27.36■■□□□ 1.97
C9orf3-207ENST00000445181 WASF1Q92558 559 aa27.36■■□□□ 1.97
C9orf3-207ENST00000445181 ZSCAN31Q96LW9 406 aaPredicted RBP27.36■■□□□ 1.97
C9orf3-207ENST00000445181 AIFM3Q96NN9 605 aa27.36■■□□□ 1.97
C9orf3-207ENST00000445181 POLR3EQ9NVU0 708 aa27.36■■□□□ 1.97
C9orf3-207ENST00000445181 TBX21Q9UL17 535 aa27.36■■□□□ 1.97
C9orf3-207ENST00000445181 TLR3O15455 904 aaKnown RBP27.35■■□□□ 1.97
C9orf3-207ENST00000445181 XBP1P17861 261 aa27.35■■□□□ 1.97
C9orf3-207ENST00000445181 ITGA7Q13683 1181 aa27.35■■□□□ 1.97
C9orf3-207ENST00000445181 LAMC2Q13753 1193 aa27.35■■□□□ 1.97
C9orf3-207ENST00000445181 FAM126BQ8IXS8 530 aa27.35■■□□□ 1.97
C9orf3-207ENST00000445181 SLC43A3Q8NBI5 491 aa27.35■■□□□ 1.97
C9orf3-207ENST00000445181 AFG1LQ8WV93 481 aa27.35■■□□□ 1.97
C9orf3-207ENST00000445181 SZT2Q5T011 3432 aa27.34■■□□□ 1.97
C9orf3-207ENST00000445181 A6NJR5 290 aa27.34■■□□□ 1.97
C9orf3-207ENST00000445181 SPATA31C2B4DYI2 1134 aa27.34■■□□□ 1.97
C9orf3-207ENST00000445181 GGPS1O95749 300 aa27.34■■□□□ 1.97
C9orf3-207ENST00000445181 TIMP1P01033 207 aa27.34■■□□□ 1.97
C9orf3-207ENST00000445181 UBA1P22314 1058 aaKnown RBP27.34■■□□□ 1.97
C9orf3-207ENST00000445181 ICAM3P32942 547 aa27.34■■□□□ 1.97
C9orf3-207ENST00000445181 DEFB123Q8N688 67 aa27.34■■□□□ 1.97
C9orf3-207ENST00000445181 MLXIPQ9HAP2 919 aa27.34■■□□□ 1.97
C9orf3-207ENST00000445181 GRIN2DO15399 1336 aa27.34■■□□□ 1.97
C9orf3-207ENST00000445181 ADAMTS3O15072 1205 aa27.33■■□□□ 1.97
C9orf3-207ENST00000445181 ZNF76P36508 570 aa27.33■■□□□ 1.97
C9orf3-207ENST00000445181 SREBF1P36956 1147 aa27.33■■□□□ 1.97
C9orf3-207ENST00000445181 EPHB4P54760 987 aa27.33■■□□□ 1.97
C9orf3-207ENST00000445181 SP2Q02086 613 aa27.33■■□□□ 1.97
C9orf3-207ENST00000445181 FPGSQ05932 587 aa27.33■■□□□ 1.97
C9orf3-207ENST00000445181 CELF3Q5SZQ8 465 aaKnown RBP27.33■■□□□ 1.97
C9orf3-207ENST00000445181 CCDC83Q8IWF9 413 aa27.33■■□□□ 1.97
C9orf3-207ENST00000445181 NSUN7Q8NE18 718 aaKnown RBP27.33■■□□□ 1.97
C9orf3-207ENST00000445181 RASGRP4Q8TDF6 673 aa27.33■■□□□ 1.97
C9orf3-207ENST00000445181 GPRASP2Q96D09 838 aa27.33■■□□□ 1.97
C9orf3-207ENST00000445181 CDHR1Q96JP9 859 aa27.33■■□□□ 1.97
C9orf3-207ENST00000445181 SH2B1Q9NRF2 756 aaPredicted RBP27.33■■□□□ 1.97
C9orf3-207ENST00000445181 PCDHA4Q9UN74 947 aa27.33■■□□□ 1.97
C9orf3-207ENST00000445181 KPNA6O60684 536 aa27.32■■□□□ 1.96
C9orf3-207ENST00000445181 MMP3P08254 477 aa27.32■■□□□ 1.96
C9orf3-207ENST00000445181 PSMC6P62333 389 aa27.32■■□□□ 1.96
C9orf3-207ENST00000445181 MTMR1Q13613 665 aa27.32■■□□□ 1.96
C9orf3-207ENST00000445181 NEDD9Q14511 834 aa27.32■■□□□ 1.96
C9orf3-207ENST00000445181 Q7L0L9 218 aa27.32■■□□□ 1.96
C9orf3-207ENST00000445181 FAM177A1Q8N128 213 aaPredicted RBP27.32■■□□□ 1.96
C9orf3-207ENST00000445181 IL27Q8NEV9 243 aa27.32■■□□□ 1.96
C9orf3-207ENST00000445181 EMID1Q96A84 441 aaPredicted RBP27.32■■□□□ 1.96
C9orf3-207ENST00000445181 SPATA33Q96N06 139 aa27.32■■□□□ 1.96
C9orf3-207ENST00000445181 ALG1Q9BT22 464 aa27.32■■□□□ 1.96
C9orf3-207ENST00000445181 UBIAD1Q9Y5Z9 338 aa27.32■■□□□ 1.96
C9orf3-207ENST00000445181 CD4P01730 458 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms