RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 VTI1AQ96AJ9 217 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 COA7Q96BR5 231 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 DHX58Q96C10 678 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 HVCN1Q96D96 273 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 EPSTI1Q96J88 318 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 CHAMP1Q96JM3 812 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 CALR3Q96L12 384 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 CEP63Q96MT8 703 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 CLIC6Q96NY7 704 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 NACC1Q96RE7 527 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 HSD17B14Q9BPX1 270 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 MXRA8Q9BRK3 442 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 NTPCRQ9BSD7 190 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 MMTAG2Q9BU76 263 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 MKNK1Q9BUB5 465 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 TEX13BQ9BXU2 312 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 FHDC1Q9C0D6 1143 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 NUCKS1Q9H1E3 243 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 TMEM60Q9H2L4 133 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 TMX1Q9H3N1 280 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 MROH8Q9H579 483 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 VAT1LQ9HCJ6 419 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 JADE2Q9NQC1 790 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ANKEF1Q9NU02 776 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 SPTLC3Q9NUV7 552 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ZNHIT6Q9NWK9 470 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 TMOD4Q9NZQ9 345 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 BIN2Q9UBW5 565 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ADD3Q9UEY8 706 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 LIMA1Q9UHB6 759 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 SERTAD1Q9UHV2 236 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 DBR1Q9UK59 544 aaKnown RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 FBXL5Q9UKA1 691 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 PNMA3Q9UL41 463 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ZNF214Q9UL59 606 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 FAM184BQ9ULE4 1060 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 DNM3Q9UQ16 869 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 UBIAD1Q9Y5Z9 338 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 CSADQ9Y600 493 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 ATP8B3O60423 1300 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 NFASCO94856 1347 aa3.16□□□□□ -1.9
LINC00393-201ENST00000443621 FRMPD2Q68DX3 1309 aaPredicted RBP3.16□□□□□ -1.9
LINC00393-201ENST00000443621 A0A087X0B3 334 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 A0A1W2PQJ5 194 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 hCG_1642624A0A1W2PR95 340 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 GTPBP10A4D1E9 387 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 FAM205CA6NFA0 338 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 IPO5O00410 1097 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PDXKO00764 312 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 KIAA0391O15091 583 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PMM2O15305 246 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 MSH4O15457 936 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ARHGAP6O43182 974 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 GAS2O43903 313 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 KLRC4O43908 158 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 MARCH6O60337 910 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 USP2O75604 605 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 EIF3JO75822 258 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ATG7O95352 703 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 GDF11O95390 407 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 SERPINC1P01008 464 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 P4HBP07237 508 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 TPM1P09493 284 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ZBTB48P10074 688 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PLCG1P19174 1290 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 EDNRBP24530 442 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 BRD2P25440 801 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 RPL13P26373 211 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ANXA13P27216 316 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 HNRNPH3P31942 346 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 SLC16A2P36021 539 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PBX1P40424 430 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 TXKP42681 527 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 GCLCP48506 637 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 SLC26A2P50443 739 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PRELPP51888 382 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 JAK3P52333 1124 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 SLC12A3P55017 1021 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 UBASH3AP57075 661 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 INHBEP58166 350 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 JAG1P78504 1218 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 FANCCQ00597 558 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 FKBP3Q00688 224 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 ATP2B2Q01814 1243 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 POU5F1Q01860 360 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 GRIN1Q05586 938 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 SPP2Q13103 211 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 IKQ13123 557 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 TBX2Q13207 712 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 GRB10Q13322 594 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 PNOCQ13519 176 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 TUBB2AQ13885 445 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 KARSQ15046 597 aaKnown RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 TCP11X2Q5H9J9 407 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 FAM83BQ5T0W9 1011 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 NBPF12Q5TAG4 269 aaPredicted RBP3.15□□□□□ -1.91
LINC00393-201ENST00000443621 JAKMIP3Q5VZ66 844 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 SPECC1LQ69YQ0 1117 aa3.15□□□□□ -1.91
LINC00393-201ENST00000443621 USP17L6PQ6QN14 398 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms