RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ANO6Q4KMQ2 910 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 RRAGBQ5VZM2 374 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 FAM20AQ96MK3 541 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 DISC1Q9NRI5 854 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 GUCY2CP25092 1073 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 STAT6P42226 847 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 UBXN2AP68543 259 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 E2F4Q16254 413 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 ASCC2Q9H1I8 757 aaPredicted RBP9.07□□□□□ -0.96
CCDC39-201ENST00000442201 SPTLC3Q9NUV7 552 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 COL20A1Q9P218 1284 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 TUBE1Q9UJT0 475 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 SH3BP1Q9Y3L3 701 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 FOXN1O15353 648 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 GJA5P36382 358 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 MDM2Q00987 491 aaPredicted RBP9.07□□□□□ -0.96
CCDC39-201ENST00000442201 CEP55Q53EZ4 464 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 KRT79Q5XKE5 535 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 ICE2Q659A1 982 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 FAM200AQ8TCP9 573 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 LENG9Q96B70 501 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 CALML4Q96GE6 196 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 MAF1Q9H063 256 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 ACAD9Q9H845 621 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 PCDHA5Q9Y5H7 936 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 OTOFQ9HC10 1997 aa9.07□□□□□ -0.96
CCDC39-201ENST00000442201 POTEMA6NI47 508 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 SMC2O95347 1197 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 OSBPP22059 807 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 AFMP43652 599 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 HERVK_113P62684 666 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 BAATQ14032 418 aaPredicted RBP9.06□□□□□ -0.96
CCDC39-201ENST00000442201 CHADLQ6NUI6 762 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 SLC30A10Q6XR72 485 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 EP400NLQ6ZTU2 488 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 PLA2G4DQ86XP0 818 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 ETNPPLQ8TBG4 499 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 TSC1Q92574 1164 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 PAGE5Q96GU1 130 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 DNAJC25Q9H1X3 360 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 DONSONQ9NYP3 566 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 IGLV3-22A0A075B6J6 115 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 BIN1O00499 593 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 ZNF165P49910 485 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 MOGSQ13724 837 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 PDXDC2PQ6P474 469 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 SH3RF1Q7Z6J0 888 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 GRAMD1CQ8IYS0 662 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 CHST13Q8NET6 341 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 CYP2W1Q8TAV3 490 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 SMARCE1Q969G3 411 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 CDK5RAP3Q96JB5 506 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 TAAR1Q96RJ0 339 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 CUEDC2Q9H467 287 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 RPTORQ8N122 1335 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 MSH4O15457 936 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 GTF2A1P52655 376 aaPredicted RBP9.06□□□□□ -0.96
CCDC39-201ENST00000442201 SETQ01105 290 aaPredicted RBP9.06□□□□□ -0.96
CCDC39-201ENST00000442201 UVSSAQ2YD98 709 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 SNX29Q8TEQ0 813 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 GJA10Q969M2 543 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 UIMC1Q96RL1 719 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 RMDN3Q96TC7 470 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 MMTAG2Q9BU76 263 aaKnown RBP9.06□□□□□ -0.96
CCDC39-201ENST00000442201 NAT10Q9H0A0 1025 aaKnown RBP9.06□□□□□ -0.96
CCDC39-201ENST00000442201 BTBD7Q9P203 1132 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 FBXO40Q9UH90 709 aa9.06□□□□□ -0.96
CCDC39-201ENST00000442201 MEIS1O00470 390 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 KIF1CO43896 1103 aaKnown RBP9.05□□□□□ -0.96
CCDC39-201ENST00000442201 ITGBL1O95965 494 aaPredicted RBP9.05□□□□□ -0.96
CCDC39-201ENST00000442201 CETPP11597 493 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 PLCG1P19174 1290 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 EIF2AK2P19525 551 aaKnown RBP9.05□□□□□ -0.96
CCDC39-201ENST00000442201 GTF2A2P52657 109 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 NLRP12P59046 1061 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 PCNX4Q63HM2 1172 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 GPAT2Q6NUI2 795 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 RIOX2Q8IUF8 465 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 PLIN2Q99541 437 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 PAGR1Q9BTK6 254 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 SPATC1LQ9H0A9 340 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 MAGEF1Q9HAY2 307 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 A0A087WWV3 80 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 NAALADL2Q58DX5 795 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 ARHGEF16Q5VV41 709 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 STAMQ92783 540 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 MXRA8Q9BRK3 442 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 PDCD2LQ9BRP1 358 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 A1CFQ9NQ94 594 aaKnown RBP9.05□□□□□ -0.96
CCDC39-201ENST00000442201 PNMA3Q9UL41 463 aa9.05□□□□□ -0.96
CCDC39-201ENST00000442201 DPCR1Q3MIW9 517 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 NT5DC1Q5TFE4 455 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 POTEEQ6S8J3 1075 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 NIPA1Q7RTP0 329 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 TRIML1Q8N9V2 468 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 IL31RAQ8NI17 732 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 SPATA20Q8TB22 786 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 CBX8Q9HC52 389 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 PXMP2Q9NR77 195 aa9.04□□□□□ -0.96
CCDC39-201ENST00000442201 CYP39A1Q9NYL5 469 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 209.8 ms