RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 SMRP1Q8NCR6 262 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 MSLNLQ96KJ4 702 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 NUP88Q99567 741 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-210ENST00000441703 WDR11Q9BZH6 1224 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 CRNKL1Q9BZJ0 848 aaKnown RBP7.52□□□□□ -1.21
HDAC6-210ENST00000441703 KANSL2Q9H9L4 492 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 PCDHGC5Q9Y5F6 944 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 MICAL3Q7RTP6 2002 aa7.52□□□□□ -1.21
HDAC6-210ENST00000441703 RALGAPA2Q2PPJ7 1873 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 MYO7AQ13402 2215 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 DMDP11532 3685 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 LCTP09848 1927 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 ATRXP46100 2492 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 MAGEB6P1A0A0J9YX57 407 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 PNMA6EA0A0J9YXQ4 647 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 GRM6O15303 877 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 CKBP12277 381 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 FAM193AP78312 1265 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 EVX2Q03828 476 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 GABPB1Q06547 395 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-210ENST00000441703 SLC20A2Q08357 652 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 DMWDQ09019 674 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 COASYQ13057 564 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 MTMR3Q13615 1198 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 GPNMBQ14956 572 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 TMEM63BQ5T3F8 832 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 AMOTL1Q8IY63 956 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 ZNF710Q8N1W2 664 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 KREMEN2Q8NCW0 462 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 DYNLL2Q96FJ2 89 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 KIF2CQ99661 725 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 SH2B1Q9NRF2 756 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-210ENST00000441703 DBNLQ9UJU6 430 aaKnown RBP7.51□□□□□ -1.21
HDAC6-210ENST00000441703 ACACBO00763 2458 aa7.51□□□□□ -1.21
HDAC6-210ENST00000441703 MYH7P12883 1935 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 UNC79Q9P2D8 2635 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 NKRFO15226 690 aaKnown RBP eCLIP7.5□□□□□ -1.21
HDAC6-210ENST00000441703 CYP2D6P10635 497 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 RLBP1P12271 317 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 ATF7P17544 494 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-210ENST00000441703 CLCN5P51795 746 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 OAZ1P54368 228 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 RBL2Q08999 1139 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 PPP2R5BQ15173 497 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 ANGPT1Q15389 498 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 SYCP1Q15431 976 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 GDF6Q6KF10 455 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-210ENST00000441703 EFHBQ8N7U6 833 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 FLCNQ8NFG4 579 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 DBF4BQ8NFT6 615 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 CYP2W1Q8TAV3 490 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 RUBCNQ92622 972 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 SLC38A10Q9HBR0 1119 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 DCP1AQ9NPI6 582 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-210ENST00000441703 A1CFQ9NQ94 594 aaKnown RBP7.5□□□□□ -1.21
HDAC6-210ENST00000441703 IGSF5Q9NSI5 407 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 RNF146Q9NTX7 359 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 SPTLC3Q9NUV7 552 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 NOB1Q9ULX3 412 aaKnown RBP7.5□□□□□ -1.21
HDAC6-210ENST00000441703 BARX2Q9UMQ3 279 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-210ENST00000441703 SORCS3Q9UPU3 1222 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 EMSYQ7Z589 1322 aa7.5□□□□□ -1.21
HDAC6-210ENST00000441703 ATG2AQ2TAZ0 1938 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 C5orf67F2Z3F1 127 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 MMP1P03956 469 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 GNAI2P04899 355 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 SP100P23497 879 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-210ENST00000441703 BMPR1AP36894 532 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 CBX1P83916 185 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 NUCB1Q02818 461 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 PDE4BQ07343 736 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 TKFCQ3LXA3 575 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 BMP2KLQ5H9B9 411 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 ZKSCAN2Q63HK3 967 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 ZC3H14Q6PJT7 736 aaKnown RBP7.49□□□□□ -1.21
HDAC6-210ENST00000441703 PDCL2Q8N4E4 241 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 PIBF1Q8WXW3 757 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 SEPT8Q92599 483 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 DHX38Q92620 1227 aaKnown RBP7.49□□□□□ -1.21
HDAC6-210ENST00000441703 TOP1MTQ969P6 601 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 IL17RAQ96F46 866 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 IFIH1Q9BYX4 1025 aaKnown RBP7.49□□□□□ -1.21
HDAC6-210ENST00000441703 TLR7Q9NYK1 1049 aaKnown RBP7.49□□□□□ -1.21
HDAC6-210ENST00000441703 OGFRQ9NZT2 677 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 CLEC1BQ9P126 229 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 FEM1BQ9UK73 627 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 DDX19BQ9UMR2 479 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 NR2E1Q9Y466 385 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 KIF3AQ9Y496 699 aa7.49□□□□□ -1.21
HDAC6-210ENST00000441703 DNAH14Q0VDD8 3507 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 F5H6K3 240 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 MBD3O95983 291 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 NDUFB10O96000 172 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 TPM3P06753 285 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 SRGAP2BP0DMP2 458 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 FDX1P10109 184 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 ALAS1P13196 640 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 PDE6AP16499 860 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 NRIP1P48552 1158 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 CDK8P49336 464 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms