RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 NAPAP54920 295 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 MRPS25P82663 173 aaKnown RBP16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 GRB10Q13322 594 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 SKIDA1Q1XH10 827 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 SLC4A8Q2Y0W8 1093 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 TMEM47Q9BQJ4 181 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 TFCP2L1Q9NZI6 479 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 GNA11P29992 359 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 APBA1Q02410 837 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 CFAP221Q4G0U5 840 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 ZIM3Q96PE6 472 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 MKNK2Q9HBH9 465 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 C6orf50Q9HD87 102 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 ATAD5Q96QE3 1844 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 KLRF2D3W0D1 207 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 GFPT1Q06210 699 aaPredicted RBP16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 EMC10Q5UCC4 262 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 IFT20Q8IY31 132 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 IQCKQ8N0W5 287 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 MICALL1Q8N3F8 863 aa16.87■□□□□ 0.29
CDC42EP4-202ENST00000439510 SMCO2A6NFE2 343 aa16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 ERLIN2O94905 339 aa16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 SLC1A4P43007 532 aa16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 GTF2A1P52655 376 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 EHHADHQ08426 723 aa16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 SLC10A5Q5PT55 438 aa16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 MMS22LQ6ZRQ5 1243 aa16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 MREGQ8N565 214 aa16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 MTMR9Q96QG7 549 aa16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 ZEB2O60315 1214 aa16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 RASSF7Q02833 373 aa16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 SPTY2D1Q68D10 685 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 DZIP1Q86YF9 867 aaKnown RBP16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 SYN2Q92777 582 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 PNMA5Q96PV4 448 aa16.86■□□□□ 0.29
CDC42EP4-202ENST00000439510 UTRNP46939 3433 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 PLSCR1O15162 318 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 GLI1P08151 1106 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 DEFB132Q7Z7B7 95 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 TBCKQ8TEA7 893 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 LARP4BQ92615 738 aaKnown RBP16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 SETDB2Q96T68 719 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 ANKRD2Q9GZV1 360 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 CDK5RAP2Q96SN8 1893 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 GOLGA8HP0CJ92 632 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 GUCY2CP25092 1073 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 RPS8P62241 208 aaKnown RBP16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 CD302Q8IX05 232 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 ANKRD13CQ8N6S4 541 aa16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 NUCKS1Q9H1E3 243 aaKnown RBP16.85■□□□□ 0.29
CDC42EP4-202ENST00000439510 IRS2Q9Y4H2 1338 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 GRID2IPA4D2P6 1211 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 KCNMA1Q12791 1236 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 PAK2Q13177 524 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 KDM7AQ6ZMT4 941 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 ZNF444Q8N0Y2 327 aaPredicted RBP16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 KAT2BQ92831 832 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 MS4A14Q96JA4 679 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 YY1AP1Q9H869 796 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 RIC8AQ9NPQ8 531 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 STX8Q9UNK0 236 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 RASA1P20936 1047 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 SMARCA1P28370 1054 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 LIG3P49916 1009 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 PSMD2Q13200 908 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 CACNA2D4Q7Z3S7 1137 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 NBPF5PQ86XG9 351 aaPredicted RBP16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 C1orf131Q8NDD1 294 aaKnown RBP16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 SH3RF3Q8TEJ3 882 aaPredicted RBP16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 CEP72Q9P209 647 aa16.84■□□□□ 0.29
CDC42EP4-202ENST00000439510 ESYT2A0FGR8 921 aa16.83■□□□□ 0.29
CDC42EP4-202ENST00000439510 ZNF233A6NK53 670 aa16.83■□□□□ 0.29
CDC42EP4-202ENST00000439510 BUB1O43683 1085 aa16.83■□□□□ 0.29
CDC42EP4-202ENST00000439510 CARSP49589 748 aaKnown RBP16.83■□□□□ 0.29
CDC42EP4-202ENST00000439510 KRT14P02533 472 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 SERPING1P05155 500 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 TXKP42681 527 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 PDCLQ13371 301 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 NAB2Q15742 525 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 SLC9C1Q4G0N8 1177 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 TTC19Q6DKK2 380 aaPredicted RBP16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 B4GALNT4Q76KP1 1039 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 SLC44A5Q8NCS7 719 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 RAD54LQ92698 747 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 CPVLQ9H3G5 476 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 MTMR7Q9Y216 660 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 SNED1Q8TER0 1413 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 TLR2O60603 784 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 HEXIM1O94992 359 aaKnown RBP16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 FAM153BP0C7A2 387 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 ATP2B2Q01814 1243 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 FAM153CQ494X1 144 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 ZCWPW2Q504Y3 356 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 DYMQ7RTS9 669 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 SPATS2Q86XZ4 545 aaKnown RBP16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 REXO1Q8N1G1 1221 aaKnown RBP16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 PIK3R5Q8WYR1 880 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 CCDC43Q96MW1 224 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms