RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ZFP91Q96JP5 570 aaPredicted RBP15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 VCPKMTQ9H867 229 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 EXOC1Q9NV70 894 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 POTEMA6NI47 508 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 EFCAB8A8MWE9 144 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 USP17L15C9J2P7 530 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 USP17L13C9JLJ4 530 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 USP17L11C9JVI0 530 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 USP17L18D6R9N7 530 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 USP17L22D6RA61 530 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 USP17L17D6RBQ6 530 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 USP17L19D6RCP7 530 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 USP17L20D6RJB6 530 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 EDIL3O43854 480 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 MYL1P05976 194 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 ERVK-24P63145 666 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 USP17L24Q0WX57 530 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 STK4Q13043 487 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 USP17L6PQ6QN14 398 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 TRPM4Q8TD43 1214 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 SH2D4AQ9H788 454 aa15.48■□□□□ 0.07
PTCHD3-201ENST00000438700 KRT9P35527 623 aa15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 SMC1AQ14683 1233 aaKnown RBP15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 UBXN6Q9BZV1 441 aa15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 SMCHD1A6NHR9 2005 aa15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 ORC2Q13416 577 aaPredicted RBP15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 NBPF12Q5TAG4 269 aaPredicted RBP15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 ANGEL2Q5VTE6 544 aaKnown RBP15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 TTI2Q6NXR4 508 aa15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 CSGALNACT2Q8N6G5 542 aa15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 GJA10Q969M2 543 aa15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 CALML4Q96GE6 196 aa15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 UIMC1Q96RL1 719 aa15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 ZNF341Q9BYN7 854 aa15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 GLT8D2Q9H1C3 349 aa15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 CUEDC2Q9H467 287 aa15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 GPRC5DQ9NZD1 345 aa15.47■□□□□ 0.07
PTCHD3-201ENST00000438700 ABL1P00519 1130 aa15.46■□□□□ 0.07
PTCHD3-201ENST00000438700 GPC2Q8N158 579 aa15.46■□□□□ 0.07
PTCHD3-201ENST00000438700 PARD6BQ9BYG5 372 aa15.46■□□□□ 0.07
PTCHD3-201ENST00000438700 LRWD1Q9UFC0 647 aa15.46■□□□□ 0.07
PTCHD3-201ENST00000438700 FEZ2Q9UHY8 353 aaPredicted RBP15.46■□□□□ 0.07
PTCHD3-201ENST00000438700 LCMT1Q9UIC8 334 aa15.46■□□□□ 0.07
PTCHD3-201ENST00000438700 B4DLN1 442 aa15.46■□□□□ 0.06
PTCHD3-201ENST00000438700 CCDC51Q96ER9 411 aa15.46■□□□□ 0.06
PTCHD3-201ENST00000438700 MTMR9Q96QG7 549 aa15.46■□□□□ 0.06
PTCHD3-201ENST00000438700 MAGEC2Q9UBF1 373 aaPredicted RBP15.46■□□□□ 0.06
PTCHD3-201ENST00000438700 MRFAP1Q9Y605 127 aa15.46■□□□□ 0.06
PTCHD3-201ENST00000438700 TTC26A0AVF1 554 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 LGALS16A8MUM7 142 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 MAP3K9P80192 1104 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 GRB10Q13322 594 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 MCM6Q14566 821 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 DYMQ7RTS9 669 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 MB21D1Q8N884 522 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 DUSP9Q99956 384 aaKnown RBP15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 THAP9Q9H5L6 903 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 MAGEF1Q9HAY2 307 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 SLC39A2Q9NP94 309 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 SRCAPQ6ZRS2 3230 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 MEIS2O14770 477 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 TFRCP02786 760 aaKnown RBP15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 PPP2R3AQ06190 1150 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 PRAMEF18Q5VWM3 479 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 ANKRD40Q6AI12 368 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 CCDC47Q96A33 483 aaKnown RBP15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 CDK5RAP3Q96JB5 506 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 CHP1Q99653 195 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 C7orf25Q9BPX7 421 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 NUDT12Q9BQG2 462 aa15.45■□□□□ 0.06
PTCHD3-201ENST00000438700 H3BQF6 201 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 EEF1GP26641 437 aaKnown RBP15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 EPS15P42566 896 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 TRIM14Q14142 442 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 CYP26C1Q6V0L0 522 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 TMTC1Q8IUR5 882 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 KIAA0895Q8NCT3 520 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 CHURC1Q8WUH1 139 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 P2RX5Q93086 422 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 SLF1Q9BQI6 1058 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 ANO3Q9BYT9 981 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 BLOC1S4Q9NUP1 217 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 FBXO28Q9NVF7 368 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 TRIM66O15016 1216 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 NKRFO15226 690 aaKnown RBP eCLIP15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 KIF5CO60282 957 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 CTNND1O60716 968 aaKnown RBP15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 FECHP22830 423 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 INPP5BP32019 993 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 FAM193AP78312 1265 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 AMPD3Q01432 767 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 TMEM266Q2M3C6 531 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 ZNF569Q5MCW4 686 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 PPP4R3AQ6IN85 833 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 CCDC174Q6PII3 467 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 APOBEC3FQ8IUX4 373 aaKnown RBP15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 DHTKD1Q96HY7 919 aaPredicted RBP15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 P2RX7Q99572 595 aaKnown RBP15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 TUBGCP2Q9BSJ2 902 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms