RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 THPOP40225 353 aa16.46■□□□□ 0.23
LINC01088-201ENST00000437737 VPS53Q5VIR6 699 aa16.46■□□□□ 0.23
LINC01088-201ENST00000437737 HFE2Q6ZVN8 426 aa16.46■□□□□ 0.23
LINC01088-201ENST00000437737 ADHFE1Q8IWW8 467 aa16.46■□□□□ 0.23
LINC01088-201ENST00000437737 MFSD14AQ96MC6 490 aa16.46■□□□□ 0.23
LINC01088-201ENST00000437737 DCTPP1Q9H773 170 aa16.46■□□□□ 0.23
LINC01088-201ENST00000437737 TCP11L1Q9NUJ3 509 aa16.46■□□□□ 0.23
LINC01088-201ENST00000437737 DDX41Q9UJV9 622 aaKnown RBP16.46■□□□□ 0.23
LINC01088-201ENST00000437737 MRVI1Q9Y6F6 885 aa16.46■□□□□ 0.23
LINC01088-201ENST00000437737 ZNF318Q5VUA4 2279 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 ATG2AQ2TAZ0 1938 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 RSPH10B2B2RC85 870 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 HAS3O00219 553 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 UPP2O95045 317 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 FGRP09769 529 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 RSPH10BP0C881 870 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 LAMC2Q13753 1193 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 ARHGEF16Q5VV41 709 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 FBXO11Q86XK2 927 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 TMEM192Q8IY95 271 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 PPTC7Q8NI37 304 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 PI4K2BQ8TCG2 481 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 SYTL5Q8TDW5 730 aaPredicted RBP16.45■□□□□ 0.22
LINC01088-201ENST00000437737 TBC1D5Q92609 795 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 IWS1Q96ST2 819 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 RMDN3Q96TC7 470 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 ABCB11O95342 1321 aa16.45■□□□□ 0.22
LINC01088-201ENST00000437737 C19orf67A6NJJ6 358 aa16.44■□□□□ 0.22
LINC01088-201ENST00000437737 GOLGA8HP0CJ92 632 aa16.44■□□□□ 0.22
LINC01088-201ENST00000437737 EIF2AK2P19525 551 aaKnown RBP16.44■□□□□ 0.22
LINC01088-201ENST00000437737 IRS1P35568 1242 aa16.44■□□□□ 0.22
LINC01088-201ENST00000437737 CDC37Q16543 378 aaPredicted RBP16.44■□□□□ 0.22
LINC01088-201ENST00000437737 GPATCH4Q5T3I0 446 aaKnown RBP16.44■□□□□ 0.22
LINC01088-201ENST00000437737 RPAINQ86UA6 219 aa16.44■□□□□ 0.22
LINC01088-201ENST00000437737 ANKS1AQ92625 1134 aa16.44■□□□□ 0.22
LINC01088-201ENST00000437737 EMID1Q96A84 441 aaPredicted RBP16.44■□□□□ 0.22
LINC01088-201ENST00000437737 UBA5Q9GZZ9 404 aa16.44■□□□□ 0.22
LINC01088-201ENST00000437737 CPVLQ9H3G5 476 aa16.44■□□□□ 0.22
LINC01088-201ENST00000437737 COL20A1Q9P218 1284 aa16.44■□□□□ 0.22
LINC01088-201ENST00000437737 SORBS3O60504 671 aa16.43■□□□□ 0.22
LINC01088-201ENST00000437737 SNHG28P0DPA3 235 aa16.43■□□□□ 0.22
LINC01088-201ENST00000437737 MKRN4PQ13434 485 aaPredicted RBP16.43■□□□□ 0.22
LINC01088-201ENST00000437737 CLUL1Q15846 466 aa16.43■□□□□ 0.22
LINC01088-201ENST00000437737 PLEKHG4Q58EX7 1191 aa16.43■□□□□ 0.22
LINC01088-201ENST00000437737 MCF2L2Q86YR7 1114 aa16.43■□□□□ 0.22
LINC01088-201ENST00000437737 SEPT8Q92599 483 aa16.43■□□□□ 0.22
LINC01088-201ENST00000437737 TTC14Q96N46 770 aa16.43■□□□□ 0.22
LINC01088-201ENST00000437737 POP1Q99575 1024 aaKnown RBP16.43■□□□□ 0.22
LINC01088-201ENST00000437737 MAF1Q9H063 256 aa16.43■□□□□ 0.22
LINC01088-201ENST00000437737 MUTYHQ9UIF7 546 aa16.43■□□□□ 0.22
LINC01088-201ENST00000437737 COL4A6Q14031 1691 aa16.43■□□□□ 0.22
LINC01088-201ENST00000437737 NCK2O43639 380 aa16.42■□□□□ 0.22
LINC01088-201ENST00000437737 EIF3JO75822 258 aaKnown RBP16.42■□□□□ 0.22
LINC01088-201ENST00000437737 HIC1Q14526 733 aa16.42■□□□□ 0.22
LINC01088-201ENST00000437737 COL19A1Q14993 1142 aa16.42■□□□□ 0.22
LINC01088-201ENST00000437737 SERINC5Q86VE9 423 aa16.42■□□□□ 0.22
LINC01088-201ENST00000437737 OTUD7AQ8TE49 926 aaPredicted RBP16.42■□□□□ 0.22
LINC01088-201ENST00000437737 TOP1MTQ969P6 601 aa16.42■□□□□ 0.22
LINC01088-201ENST00000437737 IFIH1Q9BYX4 1025 aaKnown RBP16.42■□□□□ 0.22
LINC01088-201ENST00000437737 MYO7AQ13402 2215 aa16.41■□□□□ 0.22
LINC01088-201ENST00000437737 C17orf102A2RUQ5 167 aa16.41■□□□□ 0.22
LINC01088-201ENST00000437737 NR3C2P08235 984 aa16.41■□□□□ 0.22
LINC01088-201ENST00000437737 CTNNB1P35222 781 aa16.41■□□□□ 0.22
LINC01088-201ENST00000437737 ALX1Q15699 326 aa16.41■□□□□ 0.22
LINC01088-201ENST00000437737 SMAD2Q15796 467 aaKnown RBP16.41■□□□□ 0.22
LINC01088-201ENST00000437737 ATP6V0A1Q93050 837 aa16.41■□□□□ 0.22
LINC01088-201ENST00000437737 SPATA33Q96N06 139 aa16.41■□□□□ 0.22
LINC01088-201ENST00000437737 MBTPS2O43462 519 aa16.4■□□□□ 0.22
LINC01088-201ENST00000437737 DHX16O60231 1041 aaKnown RBP16.4■□□□□ 0.22
LINC01088-201ENST00000437737 PPFIA4O75335 1185 aa16.4■□□□□ 0.22
LINC01088-201ENST00000437737 IGHDP01880 384 aa16.4■□□□□ 0.22
LINC01088-201ENST00000437737 FGAP02671 866 aa16.4■□□□□ 0.22
LINC01088-201ENST00000437737 CTSHP09668 335 aa16.4■□□□□ 0.22
LINC01088-201ENST00000437737 MX1P20591 662 aa16.4■□□□□ 0.22
LINC01088-201ENST00000437737 LTBRP36941 435 aa16.4■□□□□ 0.22
LINC01088-201ENST00000437737 HAND2P61296 217 aa16.4■□□□□ 0.22
LINC01088-201ENST00000437737 HERC4Q5GLZ8 1057 aaPredicted RBP16.4■□□□□ 0.22
LINC01088-201ENST00000437737 MFSD6Q6ZSS7 791 aa16.4■□□□□ 0.22
LINC01088-201ENST00000437737 FIBCD1Q8N539 461 aa16.4■□□□□ 0.22
LINC01088-201ENST00000437737 PHOX2BQ99453 314 aa16.4■□□□□ 0.22
LINC01088-201ENST00000437737 PXMP2Q9NR77 195 aa16.4■□□□□ 0.22
LINC01088-201ENST00000437737 MRPL11Q9Y3B7 192 aaKnown RBP16.4■□□□□ 0.22
LINC01088-201ENST00000437737 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.39■□□□□ 0.21
LINC01088-201ENST00000437737 CSPG5O95196 566 aa16.39■□□□□ 0.21
LINC01088-201ENST00000437737 GGPS1O95749 300 aa16.39■□□□□ 0.21
LINC01088-201ENST00000437737 CFBP00751 764 aa16.39■□□□□ 0.21
LINC01088-201ENST00000437737 MYCLP12524 364 aaPredicted RBP16.39■□□□□ 0.21
LINC01088-201ENST00000437737 HOXD8P13378 290 aaPredicted RBP16.39■□□□□ 0.21
LINC01088-201ENST00000437737 HSDL1Q3SXM5 330 aa16.39■□□□□ 0.21
LINC01088-201ENST00000437737 MYSM1Q5VVJ2 828 aa16.39■□□□□ 0.21
LINC01088-201ENST00000437737 RNF135Q8IUD6 432 aa16.39■□□□□ 0.21
LINC01088-201ENST00000437737 ADGRF4Q8IZF3 695 aa16.39■□□□□ 0.21
LINC01088-201ENST00000437737 ZKSCAN3Q9BRR0 538 aa16.39■□□□□ 0.21
LINC01088-201ENST00000437737 HELLSQ9NRZ9 838 aa16.39■□□□□ 0.21
LINC01088-201ENST00000437737 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
LINC01088-201ENST00000437737 WDFY4Q6ZS81 3184 aa16.39■□□□□ 0.21
LINC01088-201ENST00000437737 STXBP3O00186 592 aa16.38■□□□□ 0.21
LINC01088-201ENST00000437737 HSPD1P10809 573 aaKnown RBP16.38■□□□□ 0.21
LINC01088-201ENST00000437737 PTPN5P54829 565 aa16.38■□□□□ 0.21
LINC01088-201ENST00000437737 DLX2Q07687 328 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms