RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 GOLGA8DPQ0D2H9 430 aa28.68■■■□□ 2.18
CPNE1-216ENST00000437340 TRIM14Q14142 442 aa28.68■■■□□ 2.18
CPNE1-216ENST00000437340 CCDC174Q6PII3 467 aa28.68■■■□□ 2.18
CPNE1-216ENST00000437340 GUF1Q8N442 669 aaKnown RBP28.68■■■□□ 2.18
CPNE1-216ENST00000437340 CCDC51Q96ER9 411 aa28.68■■■□□ 2.18
CPNE1-216ENST00000437340 TAB2Q9NYJ8 693 aa28.68■■■□□ 2.18
CPNE1-216ENST00000437340 DYNC1I1O14576 645 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 CENPPQ6IPU0 288 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 FOXR2Q6PJQ5 311 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 DYMQ7RTS9 669 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 CNGA4Q8IV77 575 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 NAA15Q9BXJ9 866 aaKnown RBP28.67■■■□□ 2.18
CPNE1-216ENST00000437340 KIAA1683Q9H0B3 1180 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 VPS16Q9H269 839 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 GGA3Q9NZ52 723 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 KIAA1024Q9UPX6 916 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 WDR46O15213 610 aaKnown RBP28.67■■■□□ 2.18
CPNE1-216ENST00000437340 CFBP00751 764 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 TPM1P09493 284 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 KCTD17Q8N5Z5 321 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 DNAJC19Q96DA6 116 aa28.67■■■□□ 2.18
CPNE1-216ENST00000437340 ADARB2Q9NS39 739 aaKnown RBP28.67■■■□□ 2.18
CPNE1-216ENST00000437340 ZC3H4Q9UPT8 1303 aaKnown RBP28.66■■■□□ 2.18
CPNE1-216ENST00000437340 MSH4O15457 936 aa28.66■■■□□ 2.18
CPNE1-216ENST00000437340 ZNF76P36508 570 aa28.66■■■□□ 2.18
CPNE1-216ENST00000437340 RBL2Q08999 1139 aa28.66■■■□□ 2.18
CPNE1-216ENST00000437340 ANKRD40Q6AI12 368 aa28.66■■■□□ 2.18
CPNE1-216ENST00000437340 DPY19L2Q6NUT2 758 aa28.66■■■□□ 2.18
CPNE1-216ENST00000437340 APOBEC3FQ8IUX4 373 aaKnown RBP28.66■■■□□ 2.18
CPNE1-216ENST00000437340 SLC39A2Q9NP94 309 aa28.66■■■□□ 2.18
CPNE1-216ENST00000437340 ZSCAN12O43309 604 aa28.65■■■□□ 2.18
CPNE1-216ENST00000437340 LDHDQ86WU2 507 aa28.65■■■□□ 2.18
CPNE1-216ENST00000437340 A0A1W2PQC6 194 aa28.65■■■□□ 2.18
CPNE1-216ENST00000437340 POTEB3A0JP26 581 aa28.65■■■□□ 2.18
CPNE1-216ENST00000437340 LGALS16A8MUM7 142 aa28.65■■■□□ 2.18
CPNE1-216ENST00000437340 POTECB2RU33 542 aa28.65■■■□□ 2.18
CPNE1-216ENST00000437340 MFAP3LO75121 409 aa28.65■■■□□ 2.18
CPNE1-216ENST00000437340 PLA2G4BP0C869 781 aa28.65■■■□□ 2.18
CPNE1-216ENST00000437340 IDEP14735 1019 aa28.65■■■□□ 2.18
CPNE1-216ENST00000437340 RPA1P27694 616 aa28.65■■■□□ 2.18
CPNE1-216ENST00000437340 POTEBQ6S5H4 581 aa28.65■■■□□ 2.18
CPNE1-216ENST00000437340 L3MBTL3Q96JM7 780 aaPredicted RBP28.65■■■□□ 2.18
CPNE1-216ENST00000437340 FBXO28Q9NVF7 368 aa28.65■■■□□ 2.18
CPNE1-216ENST00000437340 IGLV3-22A0A075B6J6 115 aa28.64■■■□□ 2.18
CPNE1-216ENST00000437340 MED24O75448 989 aa28.64■■■□□ 2.18
CPNE1-216ENST00000437340 ICAM1P05362 532 aa28.64■■■□□ 2.18
CPNE1-216ENST00000437340 STAT3P40763 770 aa28.64■■■□□ 2.18
CPNE1-216ENST00000437340 CCDC84Q86UT8 332 aaPredicted RBP28.64■■■□□ 2.18
CPNE1-216ENST00000437340 PRPF38AQ8NAV1 312 aaKnown RBP28.64■■■□□ 2.18
CPNE1-216ENST00000437340 SCN4AP35499 1836 aa28.63■■■□□ 2.17
CPNE1-216ENST00000437340 E9PMD0 336 aa28.63■■■□□ 2.17
CPNE1-216ENST00000437340 GYPCP04921 128 aa28.63■■■□□ 2.17
CPNE1-216ENST00000437340 SLF1Q9BQI6 1058 aa28.63■■■□□ 2.17
CPNE1-216ENST00000437340 VAV3Q9UKW4 847 aa28.63■■■□□ 2.17
CPNE1-216ENST00000437340 RIOK3O14730 519 aaKnown RBP28.62■■■□□ 2.17
CPNE1-216ENST00000437340 UBXN1Q04323 297 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 LRRC63Q05C16 580 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 DCAF15Q66K64 600 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 CATSPER3Q86XQ3 398 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 CREBRFQ8IUR6 639 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 ZNF507Q8TCN5 953 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 TBC1D5Q92609 795 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 HPS3Q969F9 1004 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 HOOK2Q96ED9 719 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 SEMA6BQ9H3T3 888 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 RABGAP1Q9Y3P9 1069 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 PITPNM2Q9BZ72 1349 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 GOLGA6L9A6NEM1 432 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 FGFR1OPO95684 399 aaKnown RBP28.62■■■□□ 2.17
CPNE1-216ENST00000437340 FECHP22830 423 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 INPP5BP32019 993 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 NBPF12Q5TAG4 269 aaPredicted RBP28.62■■■□□ 2.17
CPNE1-216ENST00000437340 NCAPH2Q6IBW4 605 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 CCDC65Q8IXS2 484 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 MB21D1Q8N884 522 aa28.62■■■□□ 2.17
CPNE1-216ENST00000437340 GLTPD2A6NH11 291 aa28.61■■■□□ 2.17
CPNE1-216ENST00000437340 CASP14P31944 242 aa28.61■■■□□ 2.17
CPNE1-216ENST00000437340 DNM2P50570 870 aa28.61■■■□□ 2.17
CPNE1-216ENST00000437340 COASYQ13057 564 aa28.61■■■□□ 2.17
CPNE1-216ENST00000437340 KIF18AQ8NI77 898 aa28.61■■■□□ 2.17
CPNE1-216ENST00000437340 POLR3CQ9BUI4 534 aaPredicted RBP28.61■■■□□ 2.17
CPNE1-216ENST00000437340 PANK4Q9NVE7 773 aa28.61■■■□□ 2.17
CPNE1-216ENST00000437340 SMCHD1A6NHR9 2005 aa28.61■■■□□ 2.17
CPNE1-216ENST00000437340 SPATA31C1P0DKV0 1188 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 SLC12A3P55017 1021 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 CYP2W1Q8TAV3 490 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 CNOT6LQ96LI5 555 aaKnown RBP28.6■■■□□ 2.17
CPNE1-216ENST00000437340 TUBGCP2Q9BSJ2 902 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 SSBP05455 408 aaKnown RBP eCLIP28.6■■■□□ 2.17
CPNE1-216ENST00000437340 CYP11B2P19099 503 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 HSD17B4P51659 736 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 GHRHRQ02643 423 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 PRAMEF18Q5VWM3 479 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 GPBP1Q86WP2 473 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 UIMC1Q96RL1 719 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 PNMA2Q9UL42 364 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 CCPG1Q9ULG6 757 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 DNM3Q9UQ16 869 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 PPP2R2CQ9Y2T4 447 aa28.6■■■□□ 2.17
CPNE1-216ENST00000437340 ZNF536O15090 1300 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms