RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 CLEC1BQ9P126 229 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 NYAP2Q9P242 653 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 ISY1Q9ULR0 285 aaKnown RBP12.32□□□□□ -0.44
CPNE1-214ENST00000435747 RWDD3Q9Y3V2 267 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 SLC4A4Q9Y6R1 1079 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 EMSYQ7Z589 1322 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 GPR179Q6PRD1 2367 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 M0R2C6 588 aa12.31□□□□□ -0.44
CPNE1-214ENST00000435747 FOXP2O15409 715 aa12.31□□□□□ -0.44
CPNE1-214ENST00000435747 RNF113AO15541 343 aaKnown RBP12.31□□□□□ -0.44
CPNE1-214ENST00000435747 MBTPS1Q14703 1052 aa12.31□□□□□ -0.44
CPNE1-214ENST00000435747 ZNF618Q5T7W0 954 aa12.31□□□□□ -0.44
CPNE1-214ENST00000435747 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
CPNE1-214ENST00000435747 GIMAP6Q6P9H5 292 aa12.31□□□□□ -0.44
CPNE1-214ENST00000435747 NSMFQ6X4W1 530 aa12.31□□□□□ -0.44
CPNE1-214ENST00000435747 LRRC47Q8N1G4 583 aaKnown RBP12.31□□□□□ -0.44
CPNE1-214ENST00000435747 EFHBQ8N7U6 833 aa12.31□□□□□ -0.44
CPNE1-214ENST00000435747 COL26A1Q96A83 441 aa12.31□□□□□ -0.44
CPNE1-214ENST00000435747 PURBQ96QR8 312 aaKnown RBP12.31□□□□□ -0.44
CPNE1-214ENST00000435747 DLL3Q9NYJ7 618 aa12.31□□□□□ -0.44
CPNE1-214ENST00000435747 ADD3Q9UEY8 706 aaKnown RBP12.31□□□□□ -0.44
CPNE1-214ENST00000435747 PCDHGC5Q9Y5F6 944 aa12.31□□□□□ -0.44
CPNE1-214ENST00000435747 GPAA1O43292 621 aa12.3□□□□□ -0.44
CPNE1-214ENST00000435747 LMNAP02545 664 aaKnown RBP12.3□□□□□ -0.44
CPNE1-214ENST00000435747 MMP1P03956 469 aa12.3□□□□□ -0.44
CPNE1-214ENST00000435747 ZFYP08048 801 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-214ENST00000435747 ATF7P17544 494 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-214ENST00000435747 BMPR1AP36894 532 aa12.3□□□□□ -0.44
CPNE1-214ENST00000435747 ALDH5A1P51649 535 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-214ENST00000435747 PTK7Q13308 1070 aa12.3□□□□□ -0.44
CPNE1-214ENST00000435747 TRAF7Q6Q0C0 670 aa12.3□□□□□ -0.44
CPNE1-214ENST00000435747 COPS5Q92905 334 aa12.3□□□□□ -0.44
CPNE1-214ENST00000435747 GPATCH3Q96I76 525 aa12.3□□□□□ -0.44
CPNE1-214ENST00000435747 HINFPQ9BQA5 517 aa12.3□□□□□ -0.44
CPNE1-214ENST00000435747 IFIH1Q9BYX4 1025 aaKnown RBP12.3□□□□□ -0.44
CPNE1-214ENST00000435747 ARPP21Q9UBL0 812 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-214ENST00000435747 CLIP2Q9UDT6 1046 aa12.3□□□□□ -0.44
CPNE1-214ENST00000435747 GTF2IRD1Q9UHL9 959 aa12.3□□□□□ -0.44
CPNE1-214ENST00000435747 BARX2Q9UMQ3 279 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-214ENST00000435747 MX1P20591 662 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 RASA1P20936 1047 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 PDE4BQ07343 736 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 IKQ13123 557 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-214ENST00000435747 TRIM71Q2Q1W2 868 aaKnown RBP12.29□□□□□ -0.44
CPNE1-214ENST00000435747 MUM1L1Q5H9M0 696 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 ZMYM1Q5SVZ6 1142 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 UBALD2Q8IYN6 164 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 C7orf31Q8N865 590 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 KREMEN2Q8NCW0 462 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 SCFD2Q8WU76 684 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 IL17RAQ96F46 866 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 DDRGK1Q96HY6 314 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 SEC62Q99442 399 aaKnown RBP12.29□□□□□ -0.44
CPNE1-214ENST00000435747 MFSD1Q9H3U5 465 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 ZFYVE26Q68DK2 2539 aa12.29□□□□□ -0.44
CPNE1-214ENST00000435747 LOC102724159A0A0B4J2E5 919 aa12.28□□□□□ -0.44
CPNE1-214ENST00000435747 IGKV6D-41A0A0C4DH26 115 aa12.28□□□□□ -0.44
CPNE1-214ENST00000435747 TMEM232C9JQI7 657 aa12.28□□□□□ -0.44
CPNE1-214ENST00000435747 BMP3P12645 472 aa12.28□□□□□ -0.44
CPNE1-214ENST00000435747 STAT2P52630 851 aa12.28□□□□□ -0.44
CPNE1-214ENST00000435747 MTMR3Q13615 1198 aa12.28□□□□□ -0.44
CPNE1-214ENST00000435747 PWP2Q15269 919 aaKnown RBP12.28□□□□□ -0.44
CPNE1-214ENST00000435747 PLEKHG4Q58EX7 1191 aa12.28□□□□□ -0.44
CPNE1-214ENST00000435747 ADGRD2Q7Z7M1 963 aa12.28□□□□□ -0.44
CPNE1-214ENST00000435747 SEPT8Q92599 483 aa12.28□□□□□ -0.44
CPNE1-214ENST00000435747 SEMA4AQ9H3S1 761 aa12.28□□□□□ -0.44
CPNE1-214ENST00000435747 HDAC6Q9UBN7 1215 aa12.28□□□□□ -0.44
CPNE1-214ENST00000435747 RSPH10B2B2RC85 870 aa12.27□□□□□ -0.45
CPNE1-214ENST00000435747 RSPH10BP0C881 870 aa12.27□□□□□ -0.45
CPNE1-214ENST00000435747 TXNP10599 105 aaKnown RBP12.27□□□□□ -0.45
CPNE1-214ENST00000435747 NRIP1P48552 1158 aa12.27□□□□□ -0.45
CPNE1-214ENST00000435747 CLCN5P51795 746 aa12.27□□□□□ -0.45
CPNE1-214ENST00000435747 AAMPQ13685 434 aa12.27□□□□□ -0.45
CPNE1-214ENST00000435747 RSPO4Q2I0M5 234 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-214ENST00000435747 FAM160B2Q86V87 743 aa12.27□□□□□ -0.45
CPNE1-214ENST00000435747 SMC5Q8IY18 1101 aa12.27□□□□□ -0.45
CPNE1-214ENST00000435747 CHURC1Q8WUH1 139 aa12.27□□□□□ -0.45
CPNE1-214ENST00000435747 KAT2BQ92831 832 aa12.27□□□□□ -0.45
CPNE1-214ENST00000435747 WNT8BQ93098 351 aa12.27□□□□□ -0.45
CPNE1-214ENST00000435747 MPHOSPH6Q99547 160 aaKnown RBP12.27□□□□□ -0.45
CPNE1-214ENST00000435747 SORCS3Q9UPU3 1222 aa12.27□□□□□ -0.45
CPNE1-214ENST00000435747 SETXQ7Z333 2677 aaKnown RBP12.27□□□□□ -0.45
CPNE1-214ENST00000435747 PATL2C9JE40 543 aaKnown RBP12.26□□□□□ -0.45
CPNE1-214ENST00000435747 GLP2RO95838 553 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 MMP3P08254 477 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 GNAT2P19087 354 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 CASTP20810 708 aaKnown RBP12.26□□□□□ -0.45
CPNE1-214ENST00000435747 PDE1AP54750 535 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 PDE4DQ08499 809 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 CAMK1Q14012 370 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 BAATQ14032 418 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-214ENST00000435747 ACAP1Q15027 740 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 ANGPT1Q15389 498 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 SLFN13Q68D06 897 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 RBM23Q86U06 439 aaKnown RBP12.26□□□□□ -0.45
CPNE1-214ENST00000435747 IFNL3Q8IZI9 196 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 GMCL1P1Q8NEA9 526 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 AFG1LQ8WV93 481 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 SUSD6Q92537 303 aa12.26□□□□□ -0.45
CPNE1-214ENST00000435747 YTHDC1Q96MU7 727 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms