RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 ZNHIT6Q9NWK9 470 aaKnown RBP18.6■□□□□ 0.57
LIMK1-203ENST00000435201 TMX2Q9Y320 296 aa18.6■□□□□ 0.57
LIMK1-203ENST00000435201 KIF13BQ9NQT8 1826 aa18.59■□□□□ 0.57
LIMK1-203ENST00000435201 CIITAP33076 1130 aa18.59■□□□□ 0.57
LIMK1-203ENST00000435201 ZBED6P86452 979 aa18.59■□□□□ 0.57
LIMK1-203ENST00000435201 VWA3BQ502W6 1294 aa18.59■□□□□ 0.57
LIMK1-203ENST00000435201 PRR16Q569H4 304 aa18.59■□□□□ 0.57
LIMK1-203ENST00000435201 FAM26FQ5R3K3 315 aa18.59■□□□□ 0.57
LIMK1-203ENST00000435201 FBXO38Q6PIJ6 1188 aa18.59■□□□□ 0.57
LIMK1-203ENST00000435201 PCMTD1Q96MG8 357 aaPredicted RBP18.59■□□□□ 0.57
LIMK1-203ENST00000435201 POTEB3A0JP26 581 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 CLRN2A0PK11 232 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 POTECB2RU33 542 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 E9PMD0 336 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 RAD17O75943 681 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 KIF20AO95235 890 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 SSBP05455 408 aaKnown RBP eCLIP18.58■□□□□ 0.57
LIMK1-203ENST00000435201 PPP2R3AQ06190 1150 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 POTEBQ6S5H4 581 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 EEF2KMTQ96G04 330 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 P2RX7Q99572 595 aaKnown RBP18.58■□□□□ 0.57
LIMK1-203ENST00000435201 CHP1Q99653 195 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 SLF1Q9BQI6 1058 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 PITPNM2Q9BZ72 1349 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 CNTNAP1P78357 1384 aa18.58■□□□□ 0.57
LIMK1-203ENST00000435201 CYP3A4P08684 503 aa18.58■□□□□ 0.56
LIMK1-203ENST00000435201 SPIRE1Q08AE8 756 aa18.58■□□□□ 0.56
LIMK1-203ENST00000435201 ZNF569Q5MCW4 686 aa18.58■□□□□ 0.56
LIMK1-203ENST00000435201 LRRC55Q6ZSA7 311 aa18.58■□□□□ 0.56
LIMK1-203ENST00000435201 GPBP1Q86WP2 473 aa18.58■□□□□ 0.56
LIMK1-203ENST00000435201 MTMR14Q8NCE2 650 aa18.58■□□□□ 0.56
LIMK1-203ENST00000435201 LENG9Q96B70 501 aa18.58■□□□□ 0.56
LIMK1-203ENST00000435201 IRX2Q9BZI1 471 aaPredicted RBP18.58■□□□□ 0.56
LIMK1-203ENST00000435201 ZBTB21Q9ULJ3 1066 aa18.58■□□□□ 0.56
LIMK1-203ENST00000435201 A0A0U1RQJ8 604 aa18.57■□□□□ 0.56
LIMK1-203ENST00000435201 TBC1D12O60347 775 aa18.57■□□□□ 0.56
LIMK1-203ENST00000435201 MED24O75448 989 aa18.57■□□□□ 0.56
LIMK1-203ENST00000435201 H2AFXP16104 143 aaPredicted RBP18.57■□□□□ 0.56
LIMK1-203ENST00000435201 ARHGAP25P42331 645 aa18.57■□□□□ 0.56
LIMK1-203ENST00000435201 CDK17Q00537 523 aa18.57■□□□□ 0.56
LIMK1-203ENST00000435201 WDR59Q6PJI9 974 aa18.57■□□□□ 0.56
LIMK1-203ENST00000435201 SPICE1Q8N0Z3 855 aa18.57■□□□□ 0.56
LIMK1-203ENST00000435201 ATRIPQ8WXE1 791 aa18.57■□□□□ 0.56
LIMK1-203ENST00000435201 NDST4Q9H3R1 872 aa18.57■□□□□ 0.56
LIMK1-203ENST00000435201 COL4A5P29400 1685 aa18.57■□□□□ 0.56
LIMK1-203ENST00000435201 CTAGE9A4FU28 777 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 RASSF10A6NK89 507 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 OPLAHO14841 1288 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 CYP11B2P19099 503 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 CYLC1P35663 651 aaPredicted RBP18.56■□□□□ 0.56
LIMK1-203ENST00000435201 STAT3P40763 770 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 ECE1P42892 770 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 KRT83P78385 493 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 ZCWPW2Q504Y3 356 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 CCDC84Q86UT8 332 aaPredicted RBP18.56■□□□□ 0.56
LIMK1-203ENST00000435201 CCDC170Q8IYT3 715 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 AGBL3Q8NEM8 1001 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 SH2D4AQ9H788 454 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 FRMD3A2A2Y4 597 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 FAM86B1E9PN63 330 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 FAM86B2P0C5J1 330 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 RPA1P27694 616 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 SLC12A3P55017 1021 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 FKBP3Q00688 224 aaKnown RBP18.56■□□□□ 0.56
LIMK1-203ENST00000435201 LRRC41Q15345 812 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 ZNF662Q6ZS27 426 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 FAM83AQ86UY5 434 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 KCTD17Q8N5Z5 321 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 CHURC1Q8WUH1 139 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 HAUS4Q9H6D7 363 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 ZNF277Q9NRM2 450 aaPredicted RBP18.56■□□□□ 0.56
LIMK1-203ENST00000435201 AGPAT5Q9NUQ2 364 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 ARGLU1Q9NWB6 273 aaPredicted RBP18.56■□□□□ 0.56
LIMK1-203ENST00000435201 OGFRQ9NZT2 677 aa18.56■□□□□ 0.56
LIMK1-203ENST00000435201 PLA2G6O60733 806 aa18.55■□□□□ 0.56
LIMK1-203ENST00000435201 KRT18P05783 430 aaKnown RBP18.55■□□□□ 0.56
LIMK1-203ENST00000435201 KLK7P49862 253 aa18.55■□□□□ 0.56
LIMK1-203ENST00000435201 NCAPH2Q6IBW4 605 aa18.55■□□□□ 0.56
LIMK1-203ENST00000435201 CATSPER3Q86XQ3 398 aa18.55■□□□□ 0.56
LIMK1-203ENST00000435201 ACER1Q8TDN7 264 aa18.55■□□□□ 0.56
LIMK1-203ENST00000435201 CEP63Q96MT8 703 aa18.55■□□□□ 0.56
LIMK1-203ENST00000435201 NAPGQ99747 312 aaPredicted RBP18.55■□□□□ 0.56
LIMK1-203ENST00000435201 DDX41Q9UJV9 622 aaKnown RBP18.55■□□□□ 0.56
LIMK1-203ENST00000435201 CDC23Q9UJX2 597 aa18.55■□□□□ 0.56
LIMK1-203ENST00000435201 ZNRF3Q9ULT6 936 aa18.55■□□□□ 0.56
LIMK1-203ENST00000435201 REXO2Q9Y3B8 237 aaKnown RBP18.55■□□□□ 0.56
LIMK1-203ENST00000435201 PCDHA2Q9Y5H9 948 aa18.55■□□□□ 0.56
LIMK1-203ENST00000435201 POTEFA5A3E0 1075 aa18.54■□□□□ 0.56
LIMK1-203ENST00000435201 MSH4O15457 936 aa18.54■□□□□ 0.56
LIMK1-203ENST00000435201 IPO7O95373 1038 aaKnown RBP18.54■□□□□ 0.56
LIMK1-203ENST00000435201 GNA14O95837 355 aa18.54■□□□□ 0.56
LIMK1-203ENST00000435201 POTEIP0CG38 1075 aa18.54■□□□□ 0.56
LIMK1-203ENST00000435201 DPEP1P16444 411 aa18.54■□□□□ 0.56
LIMK1-203ENST00000435201 ZNF76P36508 570 aa18.54■□□□□ 0.56
LIMK1-203ENST00000435201 FAM83BQ5T0W9 1011 aa18.54■□□□□ 0.56
LIMK1-203ENST00000435201 POTEGQ6S5H5 508 aa18.54■□□□□ 0.56
LIMK1-203ENST00000435201 POTEEQ6S8J3 1075 aa18.54■□□□□ 0.56
LIMK1-203ENST00000435201 NIM1KQ8IY84 436 aa18.54■□□□□ 0.56
LIMK1-203ENST00000435201 SLC35F6Q8N357 371 aa18.54■□□□□ 0.56
LIMK1-203ENST00000435201 GLIS3Q8NEA6 775 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms