RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TCRBV5S2A0A599 114 aa6.41□□□□□ -1.38
PTPN4-205ENST00000433888 C9orf118A6NHY6 69 aa6.41□□□□□ -1.38
PTPN4-205ENST00000433888 HGSO14964 777 aaPredicted RBP6.41□□□□□ -1.38
PTPN4-205ENST00000433888 ETFBP38117 255 aa6.41□□□□□ -1.38
PTPN4-205ENST00000433888 LSAMPQ13449 338 aa6.41□□□□□ -1.38
PTPN4-205ENST00000433888 SLC35F1Q5T1Q4 408 aa6.41□□□□□ -1.38
PTPN4-205ENST00000433888 CPZQ66K79 652 aa6.41□□□□□ -1.38
PTPN4-205ENST00000433888 TMEM145Q8NBT3 493 aa6.41□□□□□ -1.38
PTPN4-205ENST00000433888 MBD6Q96DN6 1003 aa6.41□□□□□ -1.38
PTPN4-205ENST00000433888 CDIP1Q9H305 208 aa6.41□□□□□ -1.38
PTPN4-205ENST00000433888 CCSER2Q9H7U1 834 aa6.41□□□□□ -1.38
PTPN4-205ENST00000433888 PRKAG3Q9UGI9 489 aa6.41□□□□□ -1.38
PTPN4-205ENST00000433888 NPFFR2Q9Y5X5 522 aa6.41□□□□□ -1.38
PTPN4-205ENST00000433888 TNFRSF1AP19438 455 aa6.4□□□□□ -1.38
PTPN4-205ENST00000433888 LTBRP36941 435 aa6.4□□□□□ -1.38
PTPN4-205ENST00000433888 NKX3-2P78367 333 aa6.4□□□□□ -1.38
PTPN4-205ENST00000433888 TNNI3KQ59H18 835 aa6.4□□□□□ -1.38
PTPN4-205ENST00000433888 PPIL6Q8IXY8 311 aa6.4□□□□□ -1.38
PTPN4-205ENST00000433888 LCORQ96JN0 433 aaPredicted RBP6.4□□□□□ -1.38
PTPN4-205ENST00000433888 MATN3O15232 486 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 MYO1BO43795 1136 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 B4GALT3O60512 393 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 LRG1P02750 347 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 ZNF20P17024 532 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 MLLT6P55198 1093 aaPredicted RBP6.39□□□□□ -1.39
PTPN4-205ENST00000433888 LARP1BQ659C4 914 aaKnown RBP6.39□□□□□ -1.39
PTPN4-205ENST00000433888 BORAQ6PGQ7 559 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 TEPPQ6URK8 271 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.39□□□□□ -1.39
PTPN4-205ENST00000433888 TOE1Q96GM8 510 aaKnown RBP6.39□□□□□ -1.39
PTPN4-205ENST00000433888 YTHDC1Q96MU7 727 aaKnown RBP6.39□□□□□ -1.39
PTPN4-205ENST00000433888 C8orf49Q96NF6 230 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 KRTAP17-1Q9BYP8 105 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 DTLQ9NZJ0 730 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 HSPBP1Q9NZL4 362 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 LRP2BPQ9P2M1 347 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 COA3Q9Y2R0 106 aaPredicted RBP6.39□□□□□ -1.39
PTPN4-205ENST00000433888 PCDHA2Q9Y5H9 948 aa6.39□□□□□ -1.39
PTPN4-205ENST00000433888 DDAH1O94760 285 aa6.38□□□□□ -1.39
PTPN4-205ENST00000433888 IL13P35225 146 aa6.38□□□□□ -1.39
PTPN4-205ENST00000433888 GRIA2P42262 883 aa6.38□□□□□ -1.39
PTPN4-205ENST00000433888 CHRNA2Q15822 529 aa6.38□□□□□ -1.39
PTPN4-205ENST00000433888 FAM124AQ86V42 546 aa6.38□□□□□ -1.39
PTPN4-205ENST00000433888 LOXL4Q96JB6 756 aa6.38□□□□□ -1.39
PTPN4-205ENST00000433888 CAPN10Q9HC96 672 aa6.38□□□□□ -1.39
PTPN4-205ENST00000433888 PPP4R1LQ9P1A2 415 aa6.38□□□□□ -1.39
PTPN4-205ENST00000433888 KCNJ6P48051 423 aa6.37□□□□□ -1.39
PTPN4-205ENST00000433888 FXNQ16595 210 aa6.37□□□□□ -1.39
PTPN4-205ENST00000433888 STEAP3Q658P3 488 aa6.37□□□□□ -1.39
PTPN4-205ENST00000433888 PKN3Q6P5Z2 889 aa6.37□□□□□ -1.39
PTPN4-205ENST00000433888 LIMS2Q7Z4I7 341 aa6.37□□□□□ -1.39
PTPN4-205ENST00000433888 ZCCHC14Q8WYQ9 949 aaKnown RBP6.37□□□□□ -1.39
PTPN4-205ENST00000433888 CLDND1Q9NY35 253 aa6.37□□□□□ -1.39
PTPN4-205ENST00000433888 PCDHB4Q9Y5E5 795 aa6.37□□□□□ -1.39
PTPN4-205ENST00000433888 GJB6O95452 261 aa6.36□□□□□ -1.39
PTPN4-205ENST00000433888 SSBP05455 408 aaKnown RBP eCLIP6.36□□□□□ -1.39
PTPN4-205ENST00000433888 PRAMEF18Q5VWM3 479 aa6.36□□□□□ -1.39
PTPN4-205ENST00000433888 PROSER1Q86XN7 944 aa6.36□□□□□ -1.39
PTPN4-205ENST00000433888 VPS37DQ86XT2 251 aa6.36□□□□□ -1.39
PTPN4-205ENST00000433888 ZSWIM3Q96MP5 696 aa6.36□□□□□ -1.39
PTPN4-205ENST00000433888 SMOC1Q9H4F8 434 aa6.36□□□□□ -1.39
PTPN4-205ENST00000433888 EPB41L1Q9H4G0 881 aa6.36□□□□□ -1.39
PTPN4-205ENST00000433888 LAMTOR5O43504 91 aa6.35□□□□□ -1.39
PTPN4-205ENST00000433888 FGRP09769 529 aa6.35□□□□□ -1.39
PTPN4-205ENST00000433888 ZXDAP98168 799 aa6.35□□□□□ -1.39
PTPN4-205ENST00000433888 CDSNQ15517 529 aa6.35□□□□□ -1.39
PTPN4-205ENST00000433888 SURF1Q15526 300 aa6.35□□□□□ -1.39
PTPN4-205ENST00000433888 SLC10A6Q3KNW5 377 aa6.35□□□□□ -1.39
PTPN4-205ENST00000433888 GLB1LQ6UWU2 654 aa6.35□□□□□ -1.39
PTPN4-205ENST00000433888 PHOSPHO1Q8TCT1 267 aa6.35□□□□□ -1.39
PTPN4-205ENST00000433888 CHAMP1Q96JM3 812 aa6.35□□□□□ -1.39
PTPN4-205ENST00000433888 YIPF4Q9BSR8 244 aa6.35□□□□□ -1.39
PTPN4-205ENST00000433888 ASH2LQ9UBL3 628 aa6.35□□□□□ -1.39
PTPN4-205ENST00000433888 ST6GALNAC2Q9UJ37 374 aa6.35□□□□□ -1.39
PTPN4-205ENST00000433888 ZNF536O15090 1300 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 A0A1W2PQU0 124 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 AKAP8O43823 692 aaKnown RBP6.34□□□□□ -1.39
PTPN4-205ENST00000433888 MSCO60682 206 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 COL6A1P12109 1028 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 PPP2R2AP63151 447 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 MAP4K2Q12851 820 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 DNERQ8NFT8 737 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 DVL3Q92997 716 aaPredicted RBP6.34□□□□□ -1.39
PTPN4-205ENST00000433888 EPN3Q9H201 632 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 ZNF408Q9H9D4 720 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 CD248Q9HCU0 757 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 SLC6A20Q9NP91 592 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 MYOTQ9UBF9 498 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 RBPJLQ9UBG7 517 aa6.34□□□□□ -1.39
PTPN4-205ENST00000433888 GPR42O15529 346 aa6.33□□□□□ -1.4
PTPN4-205ENST00000433888 DLX3O60479 287 aa6.33□□□□□ -1.4
PTPN4-205ENST00000433888 DGKIO75912 1065 aa6.33□□□□□ -1.4
PTPN4-205ENST00000433888 CYP1A1P04798 512 aaPredicted RBP6.33□□□□□ -1.4
PTPN4-205ENST00000433888 ERCC5P28715 1186 aaPredicted RBP6.33□□□□□ -1.4
PTPN4-205ENST00000433888 ICAM4Q14773 271 aa6.33□□□□□ -1.4
PTPN4-205ENST00000433888 CYP4F22Q6NT55 531 aa6.33□□□□□ -1.4
PTPN4-205ENST00000433888 EEPD1Q7L9B9 569 aa6.33□□□□□ -1.4
PTPN4-205ENST00000433888 IGDCC4Q8TDY8 1250 aa6.33□□□□□ -1.4
PTPN4-205ENST00000433888 CLEC4DQ8WXI8 215 aa6.33□□□□□ -1.4
PTPN4-205ENST00000433888 CLIC6Q96NY7 704 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms