RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ECT2Q9H8V3 914 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 SNX12Q9UMY4 172 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 EFR3BQ9Y2G0 817 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 PCDHA5Q9Y5H7 936 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 CLIC4Q9Y696 253 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 SALL1Q9NSC2 1324 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 TRIM43BA6NCK2 446 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 CETN3O15182 167 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 ZNF185O15231 689 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 SUPT3HO75486 399 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 ASLP04424 464 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 TMOD1P28289 359 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 CDC27P30260 824 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 SKIV2L2P42285 1042 aaKnown RBP9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 COPS2P61201 443 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 FMR1Q06787 632 aaKnown RBP eCLIP9.7□□□□□ -0.861e-6■■■■■ 32.1
CDC42BPA-206ENST00000429440 BNIP1Q12981 228 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 PLS1Q14651 629 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 PUS10Q3MIT2 529 aaKnown RBP9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 RASIP1Q5U651 963 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 RHPN1Q8TCX5 695 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 NEK9Q8TD19 979 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 LENG1Q96BZ8 264 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 ABHD8Q96I13 439 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 SNX27Q96L92 541 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 XPO6Q96QU8 1125 aaKnown RBP9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 FAM129AQ9BZQ8 928 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 LARSQ9P2J5 1176 aaKnown RBP9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 PLAAQ9Y263 795 aa9.7□□□□□ -0.86
CDC42BPA-206ENST00000429440 ALS2Q96Q42 1657 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 PTPDC1A2A3K4 754 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 EIF3FO00303 357 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 HNRNPRO43390 633 aaKnown RBP9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 RAD21O60216 631 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 GNA14O95837 355 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 GCP02774 474 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 TPBGLP0DKB5 382 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 FUT4P22083 530 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 SERPINB4P48594 390 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 RAD23BP54727 409 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 MAP7Q14244 749 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 WASHC4Q2M389 1173 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 FAM133BQ5BKY9 247 aaKnown RBP9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 CFAP157Q5JU67 520 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 DAB2IPQ5VWQ8 1189 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 C8orf74Q6P047 294 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 MAEAQ7L5Y9 396 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 METTL16Q86W50 562 aaKnown RBP9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 FOXP4Q8IVH2 680 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 KCNH5Q8NCM2 988 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 ANKRD24Q8TF21 1146 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 EVI5LQ96CN4 794 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 PBKQ96KB5 322 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 RAB3IPQ96QF0 476 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 SAMSN1Q9NSI8 373 aaKnown RBP9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 TBCCD1Q9NVR7 557 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 SAMD15Q9P1V8 674 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 SUCLA2Q9P2R7 463 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 MYH8P13535 1937 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 MAP3K15Q6ZN16 1313 aa9.69□□□□□ -0.86
CDC42BPA-206ENST00000429440 BTBD19C9JJ37 291 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 ITGA2BP08514 1039 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 IDEP14735 1019 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 VARSP26640 1264 aaKnown RBP9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 CACNA2D1P54289 1103 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 HSP90AA4PQ58FG1 418 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 PURBQ96QR8 312 aaKnown RBP9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 JADE2Q9NQC1 790 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 CYP39A1Q9NYL5 469 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 HSFX1Q9UBD0 423 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 TRIM10Q9UDY6 481 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 AXIN2Q9Y2T1 843 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 HEG1Q9ULI3 1381 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 MYH7P12883 1935 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 MST1RQ04912 1400 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 A0A0J9YVX5 310 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 TMEM110-MUSTN1A8MSY1 372 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 H0YGN5 161 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 PPP6R2O75170 966 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 UBOX5O94941 541 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 CTDNEP1O95476 244 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 ALDH2P05091 517 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 SKIP12755 728 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 TCP1P17987 556 aaKnown RBP9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 KPNB1Q14974 876 aaKnown RBP9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 SLC39A14Q15043 492 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 P3H1Q32P28 736 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 ODF2Q5BJF6 829 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 ANO1Q5XXA6 986 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 RAB11FIP4Q86YS3 637 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 DEPTORQ8TB45 409 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 GATA6Q92908 595 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 DHTKD1Q96HY7 919 aaPredicted RBP9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 INIPQ9NRY2 104 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 TSKSQ9UJT2 592 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 NFU1Q9UMS0 254 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 CHMP2BQ9UQN3 213 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 NFS1Q9Y697 457 aa9.68□□□□□ -0.86
CDC42BPA-206ENST00000429440 MROH7Q68CQ1 1323 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms