RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 KCNJ14Q9UNX9 436 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 PLXNB2O15031 1838 aa12.78□□□□□ -0.36
CECR3-201ENST00000428828 ZNFX1Q9P2E3 1918 aaKnown RBP12.77□□□□□ -0.37
CECR3-201ENST00000428828 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.37
CECR3-201ENST00000428828 H3BQV1 296 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 TXLNAP40222 546 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 VEGFBP49765 207 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 C1QTNF8P60827 252 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 TRIM29Q14134 588 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 IFFO2Q5TF58 517 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 IFNL1Q8IU54 200 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 DHX40Q8IX18 779 aaKnown RBP12.77□□□□□ -0.37
CECR3-201ENST00000428828 FAM71BQ8TC56 605 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 SHISA4Q96DD7 197 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 CARD6Q9BX69 1037 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 AMNQ9BXJ7 453 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 CCPG1Q9ULG6 757 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 PCDHA1Q9Y5I3 950 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 THSD7BQ9C0I4 1608 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 ZNF536O15090 1300 aa12.77□□□□□ -0.37
CECR3-201ENST00000428828 MGAMO43451 1857 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 STXBP3O00186 592 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 ALAS1P13196 640 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 TMEM132BQ14DG7 1078 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 TAF1CQ15572 869 aaPredicted RBP12.76□□□□□ -0.37
CECR3-201ENST00000428828 C11orf91Q3C1V1 193 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
CECR3-201ENST00000428828 TYW1BQ6NUM6 668 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 GOLGA1Q92805 767 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 PARK7Q99497 189 aaKnown RBP12.76□□□□□ -0.37
CECR3-201ENST00000428828 PARD6BQ9BYG5 372 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 BARHL2Q9NY43 387 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 BTBD7Q9P203 1132 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 RAB21Q9UL25 225 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 MYPNQ86TC9 1320 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 ZSCAN12O43309 604 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 ICAM1P05362 532 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 XBP1P17861 261 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 ERCC3P19447 782 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 TUBB2AQ13885 445 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 E2F4Q16254 413 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 POTEEQ6S8J3 1075 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 LRRC31Q6UY01 552 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 CEP57L1Q8IYX8 460 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 REPS2Q8NFH8 660 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 TUBB2BQ9BVA1 445 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 SLC45A1Q9Y2W3 748 aa12.76□□□□□ -0.37
CECR3-201ENST00000428828 ZSWIM8A7E2V4 1837 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 NR1I2O75469 434 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 ERLIN1O75477 346 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 ECM2O94769 699 aaPredicted RBP12.75□□□□□ -0.37
CECR3-201ENST00000428828 HSPA6P17066 643 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 INHBEP58166 350 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 NLRP5P59047 1200 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 MAP2K1Q02750 393 aaPredicted RBP12.75□□□□□ -0.37
CECR3-201ENST00000428828 KRT40Q6A162 431 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 ARMCX5Q6P1M9 558 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 EP400NLQ6ZTU2 488 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 ANKRD13CQ8N6S4 541 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 CCDC34Q96HJ3 373 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 TXNRD2Q9NNW7 524 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 ZNF214Q9UL59 606 aaPredicted RBP12.75□□□□□ -0.37
CECR3-201ENST00000428828 ADAMTS5Q9UNA0 930 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 MRFAP1Q9Y605 127 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 MYH7BA7E2Y1 1941 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 LCTP09848 1927 aa12.75□□□□□ -0.37
CECR3-201ENST00000428828 URI1O94763 535 aaPredicted RBP12.74□□□□□ -0.37
CECR3-201ENST00000428828 FDX1P10109 184 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 LRCH2Q5VUJ6 765 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 C11orf57Q6ZUT1 292 aaPredicted RBP12.74□□□□□ -0.37
CECR3-201ENST00000428828 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 CCDC148Q8NFR7 591 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 ACBD3Q9H3P7 528 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 VPS18Q9P253 973 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 PLXNA1Q9UIW2 1896 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 ATXN2Q99700 1313 aaKnown RBP12.74□□□□□ -0.37
CECR3-201ENST00000428828 hCG_1984214I3L0E3 225 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 CNMDO75829 334 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 STAT3P40763 770 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 TM4SF4P48230 202 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 BEND6Q5SZJ8 279 aaPredicted RBP12.74□□□□□ -0.37
CECR3-201ENST00000428828 FERMT3Q86UX7 667 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 ZNF713Q8N859 430 aaPredicted RBP12.74□□□□□ -0.37
CECR3-201ENST00000428828 MB21D1Q8N884 522 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 JMYQ8N9B5 988 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 CCDC12Q8WUD4 166 aaPredicted RBP12.74□□□□□ -0.37
CECR3-201ENST00000428828 TEX13BQ9BXU2 312 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 GBP3Q9H0R5 595 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 RBPJLQ9UBG7 517 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 CPA4Q9UI42 421 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 RIPK3Q9Y572 518 aa12.74□□□□□ -0.37
CECR3-201ENST00000428828 CEP350Q5VT06 3117 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 SMCO2A6NFE2 343 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 TMCO5BA8MYB1 307 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 ADAMTS3O15072 1205 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 ERLIN2O94905 339 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 PPP2R3AQ06190 1150 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 CRHR2Q13324 411 aa12.73□□□□□ -0.37
CECR3-201ENST00000428828 GNL2Q13823 731 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms