RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 RUFY3Q7L099 469 aa11.77□□□□□ -0.53
HDLBP-216ENST00000428482 Q7L0L9 218 aa11.77□□□□□ -0.53
HDLBP-216ENST00000428482 VTI1AQ96AJ9 217 aa11.77□□□□□ -0.53
HDLBP-216ENST00000428482 VWCEQ96DN2 955 aa11.77□□□□□ -0.53
HDLBP-216ENST00000428482 IL17RAQ96F46 866 aa11.77□□□□□ -0.53
HDLBP-216ENST00000428482 INPP4AQ96PE3 977 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-216ENST00000428482 UIMC1Q96RL1 719 aa11.77□□□□□ -0.53
HDLBP-216ENST00000428482 ANO3Q9BYT9 981 aa11.77□□□□□ -0.53
HDLBP-216ENST00000428482 ALDH8A1Q9H2A2 487 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-216ENST00000428482 UPF2Q9HAU5 1272 aaKnown RBP11.77□□□□□ -0.53
HDLBP-216ENST00000428482 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.53
HDLBP-216ENST00000428482 TMEM39AQ9NV64 488 aa11.77□□□□□ -0.53
HDLBP-216ENST00000428482 RBM19Q9Y4C8 960 aaKnown RBP11.77□□□□□ -0.53
HDLBP-216ENST00000428482 LOXHD1Q8IVV2 1947 aa11.77□□□□□ -0.53
HDLBP-216ENST00000428482 ELP1O95163 1332 aa11.77□□□□□ -0.53
HDLBP-216ENST00000428482 A6NJR5 290 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 PIK3CDO00329 1044 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 ACRP10323 421 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 ITGB5P18084 799 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 SHHQ15465 462 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 NBPF20Q3BBV1 942 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 VSIG10LQ86VR7 867 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 DHX38Q92620 1227 aaKnown RBP11.76□□□□□ -0.53
HDLBP-216ENST00000428482 SCLYQ96I15 445 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 IWS1Q96ST2 819 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 LZTS2Q9BRK4 669 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 MTG1Q9BT17 334 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-216ENST00000428482 SLC26A6Q9BXS9 759 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 VPS54Q9P1Q0 977 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 PRKAG2Q9UGJ0 569 aa11.76□□□□□ -0.53
HDLBP-216ENST00000428482 ARID2Q68CP9 1835 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 NKRFO15226 690 aaKnown RBP eCLIP11.75□□□□□ -0.535e-7■■□□□ 12.2
HDLBP-216ENST00000428482 F2P00734 622 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 HMGB1P09429 215 aaKnown RBP11.75□□□□□ -0.53
HDLBP-216ENST00000428482 CSF2RAP15509 400 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 RAG1P15918 1043 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 PDIA3P30101 505 aaKnown RBP11.75□□□□□ -0.53
HDLBP-216ENST00000428482 BMP8BP34820 402 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 CLK2P49760 499 aaKnown RBP11.75□□□□□ -0.53
HDLBP-216ENST00000428482 ADCY7P51828 1080 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 CCL23P55773 120 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 ZNF200P98182 395 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-216ENST00000428482 PFKFB3Q16875 520 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-216ENST00000428482 GDF6Q6KF10 455 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-216ENST00000428482 PPP1R18Q6NYC8 613 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 SYNE3Q6ZMZ3 975 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 TMTC2Q8N394 836 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 CYP2W1Q8TAV3 490 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 TBC1D32Q96NH3 1257 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 MPHOSPH6Q99547 160 aaKnown RBP11.75□□□□□ -0.53
HDLBP-216ENST00000428482 NOC4LQ9BVI4 516 aaKnown RBP11.75□□□□□ -0.53
HDLBP-216ENST00000428482 BARHL2Q9NY43 387 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 TPCN1Q9ULQ1 816 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 PCDHA6Q9UN73 950 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 Q9Y3F1 56 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 PCDHA8Q9Y5H6 950 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-216ENST00000428482 ATG2AQ2TAZ0 1938 aa11.75□□□□□ -0.53
HDLBP-216ENST00000428482 ATP9AO75110 1047 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 EIF3JO75822 258 aaKnown RBP11.74□□□□□ -0.53
HDLBP-216ENST00000428482 HOXD8P13378 290 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-216ENST00000428482 SCG2P13521 617 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 KCNA2P16389 499 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 SMARCA1P28370 1054 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 FOSBP53539 338 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 RCAN1P53805 252 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 AK2P54819 239 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 SCRN1Q12765 414 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 TCTN1Q2MV58 587 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 CELF3Q5SZQ8 465 aaKnown RBP11.74□□□□□ -0.53
HDLBP-216ENST00000428482 MYSM1Q5VVJ2 828 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 JAKMIP3Q5VZ66 844 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 CYFIP1Q7L576 1253 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 PPTC7Q8NI37 304 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 CUL5Q93034 780 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 EMID1Q96A84 441 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-216ENST00000428482 ZBTB10Q96DT7 871 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 SPATA33Q96N06 139 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 LBHD1Q9BQE6 289 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-216ENST00000428482 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.74□□□□□ -0.534e-6■■□□□ 12.3
HDLBP-216ENST00000428482 ALG1Q9BT22 464 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 HIPK3Q9H422 1215 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 PSTPIP2Q9H939 334 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 GJB4Q9NTQ9 266 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 POLR3EQ9NVU0 708 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 CYP46A1Q9Y6A2 500 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 MROH7Q68CQ1 1323 aa11.74□□□□□ -0.53
HDLBP-216ENST00000428482 DCDC2CA8MYV0 355 aa11.73□□□□□ -0.53
HDLBP-216ENST00000428482 TRANK1O15050 2925 aa11.73□□□□□ -0.53
HDLBP-216ENST00000428482 LGALS2P05162 132 aa11.73□□□□□ -0.53
HDLBP-216ENST00000428482 PSMA5P28066 241 aa11.73□□□□□ -0.53
HDLBP-216ENST00000428482 PSEN2P49810 448 aa11.73□□□□□ -0.53
HDLBP-216ENST00000428482 FPGSQ05932 587 aa11.73□□□□□ -0.53
HDLBP-216ENST00000428482 MFSD10Q14728 455 aa11.73□□□□□ -0.53
HDLBP-216ENST00000428482 C16orf59Q7L2K0 433 aa11.73□□□□□ -0.53
HDLBP-216ENST00000428482 DHX37Q8IY37 1157 aaKnown RBP11.73□□□□□ -0.53
HDLBP-216ENST00000428482 FBXL16Q8N461 479 aa11.73□□□□□ -0.53
HDLBP-216ENST00000428482 TOX2Q96NM4 488 aa11.73□□□□□ -0.53
HDLBP-216ENST00000428482 KIAA1671Q9BY89 1806 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms