RNA–Protein interactions for RNA: ENST00000428400.5

CDK16-203, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 3,016 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-203ENST00000428400 JMJD4Q9H9V9 463 aa13.39□□□□□ -0.27
CDK16-203ENST00000428400 CD248Q9HCU0 757 aa13.39□□□□□ -0.27
CDK16-203ENST00000428400 FAM207AQ9NSI2 230 aaPredicted RBP13.39□□□□□ -0.27
CDK16-203ENST00000428400 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
CDK16-203ENST00000428400 CAPN7Q9Y6W3 813 aa13.39□□□□□ -0.27
CDK16-203ENST00000428400 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
CDK16-203ENST00000428400 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
CDK16-203ENST00000428400 C21orf2O43822 256 aa13.39□□□□□ -0.27
CDK16-203ENST00000428400 BBOX1O75936 387 aa13.39□□□□□ -0.27
CDK16-203ENST00000428400 IRX1P78414 480 aaPredicted RBP13.39□□□□□ -0.27
CDK16-203ENST00000428400 NFIAQ12857 509 aa13.39□□□□□ -0.27
CDK16-203ENST00000428400 LARP4BQ92615 738 aaKnown RBP13.39□□□□□ -0.27
CDK16-203ENST00000428400 ODF2LQ9ULJ1 636 aa13.39□□□□□ -0.27
CDK16-203ENST00000428400 MYO6Q9UM54 1294 aa13.39□□□□□ -0.27
CDK16-203ENST00000428400 BICDL2A1A5D9 508 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 MACROD2A1Z1Q3 448 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 NT5C2P49902 561 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 VSNL1P62760 191 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 AMPD2Q01433 879 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 GABPAQ06546 454 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 AP1ARQ63HQ0 302 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 SLF2Q8IX21 1173 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 FAM163AQ96GL9 167 aaPredicted RBP13.38□□□□□ -0.27
CDK16-203ENST00000428400 NHEJ1Q9H9Q4 299 aaPredicted RBP13.38□□□□□ -0.27
CDK16-203ENST00000428400 USP40Q9NVE5 1235 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 CTAGE15A4D2H0 777 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 USP17L10C9JJH3 530 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 POLRMTO00411 1230 aaKnown RBP13.38□□□□□ -0.27
CDK16-203ENST00000428400 ERLIN1O75477 346 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 SSBP05455 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDK16-203ENST00000428400 CTAGE8P0CG41 777 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 CNNM4Q6P4Q7 775 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 CTAGE6Q86UF2 777 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 ZFPM1Q8IX07 1006 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 CTAGE4Q8IX94 777 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 CCDC155Q8N6L0 562 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 CABS1Q96KC9 395 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 KCNQ5Q9NR82 932 aa13.38□□□□□ -0.27
CDK16-203ENST00000428400 AMPD3Q01432 767 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
CDK16-203ENST00000428400 FAM71BQ8TC56 605 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 SMCR8Q8TEV9 937 aaPredicted RBP13.37□□□□□ -0.27
CDK16-203ENST00000428400 MAGEF1Q9HAY2 307 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 ABCB6Q9NP58 842 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 IRAK4Q9NWZ3 460 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 TBC1D7Q9P0N9 293 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 SERPINB13Q9UIV8 391 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 GCFC2P16383 781 aaKnown RBP13.37□□□□□ -0.27
CDK16-203ENST00000428400 ADRA2BP18089 450 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 TCP10Q12799 353 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 AFAP1L1Q8TED9 768 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 JAKMIP2Q96AA8 810 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 ESYT2A0FGR8 921 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 TTLL1O95922 423 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 SHMT1P34896 483 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 NOVP48745 357 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 INHBEP58166 350 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 ZNF543Q08ER8 600 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 TMEM266Q2M3C6 531 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 ASPRV1Q53RT3 343 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 DDX12PQ92771 950 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 HINFPQ9BQA5 517 aa13.37□□□□□ -0.27
CDK16-203ENST00000428400 TACO1Q9BSH4 297 aaKnown RBP13.37□□□□□ -0.27
CDK16-203ENST00000428400 USP17L15C9J2P7 530 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 USP17L13C9JLJ4 530 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 USP17L11C9JVI0 530 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 USP17L18D6R9N7 530 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 USP17L22D6RA61 530 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 USP17L17D6RBQ6 530 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 USP17L19D6RCP7 530 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 USP17L20D6RJB6 530 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 ZNF185O15231 689 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 MARCH6O60337 910 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 TRIM37O94972 964 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 TAL1P17542 331 aaPredicted RBP13.36□□□□□ -0.27
CDK16-203ENST00000428400 USP17L24Q0WX57 530 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 BEND6Q5SZJ8 279 aaPredicted RBP13.36□□□□□ -0.27
CDK16-203ENST00000428400 USP17L6PQ6QN14 398 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 NOC3LQ8WTT2 800 aaKnown RBP13.36□□□□□ -0.27
CDK16-203ENST00000428400 FGFBP2Q9BYJ0 223 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 CENPHQ9H3R5 247 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 KANSL2Q9H9L4 492 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 ZNHIT6Q9NWK9 470 aaKnown RBP13.36□□□□□ -0.27
CDK16-203ENST00000428400 MYH7BA7E2Y1 1941 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 AFF2P51816 1311 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 FOCADQ5VW36 1801 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 ZNF263O14978 683 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 SNAP25P60880 206 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 ZKSCAN8Q15776 578 aaPredicted RBP13.36□□□□□ -0.27
CDK16-203ENST00000428400 MEA1Q16626 185 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 MMS19Q96T76 1030 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 ZC3H12CQ9C0D7 883 aaKnown RBP13.36□□□□□ -0.27
CDK16-203ENST00000428400 HAUS4Q9H6D7 363 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 MMRN2Q9H8L6 949 aa13.36□□□□□ -0.27
CDK16-203ENST00000428400 DDX25Q9UHL0 483 aaKnown RBP13.36□□□□□ -0.27
CDK16-203ENST00000428400 IGKV6D-41A0A0C4DH26 115 aa13.35□□□□□ -0.27
CDK16-203ENST00000428400 MYO1FO00160 1098 aa13.35□□□□□ -0.27
CDK16-203ENST00000428400 CAND2O75155 1236 aa13.35□□□□□ -0.27
CDK16-203ENST00000428400 SNHG28P0DPA3 235 aa13.35□□□□□ -0.27
CDK16-203ENST00000428400 HOXA10P31260 410 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms