RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 USP11P51784 963 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 MRPS35P82673 323 aaKnown RBP5.66□□□□□ -1.5
RIF1-203ENST00000428287 SLC7A5Q01650 507 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 PKN1Q16512 942 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 SPDYAQ5MJ70 313 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 TRPM8Q7Z2W7 1104 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 TMC3Q7Z5M5 1100 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 DHX37Q8IY37 1157 aaKnown RBP5.66□□□□□ -1.5
RIF1-203ENST00000428287 TBC1D31Q96DN5 1066 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 ZNF570Q96NI8 536 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 CNNM2Q9H8M5 875 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 TTC7AQ9ULT0 858 aaPredicted RBP5.66□□□□□ -1.5
RIF1-203ENST00000428287 TFR2Q9UP52 801 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 L3MBTL1Q9Y468 752 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 AFF2P51816 1311 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 NPTXRO95502 500 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 PCP11498 1178 aaKnown RBP5.66□□□□□ -1.5
RIF1-203ENST00000428287 GCLCP48506 637 aaPredicted RBP5.66□□□□□ -1.5
RIF1-203ENST00000428287 STX17P56962 302 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 MIIPQ5JXC2 388 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 BTNL9Q6UXG8 535 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 C4orf32Q8N8J7 132 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 CHMP6Q96FZ7 201 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 EPB41L5Q9HCM4 733 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 RGL1Q9NZL6 768 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 CEP126Q9P2H0 1117 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 ATP6V1G2O95670 118 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 GUCY1A2P33402 732 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 CLNS1AP54105 237 aaKnown RBP5.66□□□□□ -1.5
RIF1-203ENST00000428287 OCRLQ01968 901 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 KCNH5Q8NCM2 988 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 AGAP11Q8TF27 550 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 NCSTNQ92542 709 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 BORCS6Q96GS4 357 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 ALS2CR12Q96Q35 445 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 RIC1Q4ADV7 1423 aa5.66□□□□□ -1.5
RIF1-203ENST00000428287 TCRBV5S4A2TA0A5A2 114 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 GCOM1H8Y6P7 765 aaPredicted RBP5.65□□□□□ -1.5
RIF1-203ENST00000428287 MYZAPP0CAP1 466 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 KIF11P52732 1056 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 RRP12Q5JTH9 1297 aaKnown RBP5.65□□□□□ -1.5
RIF1-203ENST00000428287 PLA2G12BQ9BX93 195 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 RIPOR2Q9Y4F9 1068 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 DDX60LQ5H9U9 1706 aaKnown RBP5.65□□□□□ -1.5
RIF1-203ENST00000428287 POLR2AP24928 1970 aaKnown RBP5.65□□□□□ -1.5
RIF1-203ENST00000428287 M0R2N6 131 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 PDHBP11177 359 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 RAB27AP51159 221 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 ACCSLQ4AC99 568 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 AKNAD1Q5T1N1 836 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 RIC3Q7Z5B4 369 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 FANCBQ8NB91 859 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 PARD3BQ8TEW8 1205 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 SYMPKQ92797 1274 aaKnown RBP5.65□□□□□ -1.5
RIF1-203ENST00000428287 LTV1Q96GA3 475 aaPredicted RBP5.65□□□□□ -1.5
RIF1-203ENST00000428287 UBE2Q2LH0YL09 131 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 HEXIM1O94992 359 aaKnown RBP5.65□□□□□ -1.5
RIF1-203ENST00000428287 NPM1P06748 294 aaKnown RBP eCLIP5.65□□□□□ -1.5
RIF1-203ENST00000428287 FGRP09769 529 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 LTKP29376 864 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 UBXN1Q04323 297 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 PLBD2Q8NHP8 589 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 TRIM9Q9C026 710 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 CWC25Q9NXE8 425 aaPredicted RBP5.65□□□□□ -1.5
RIF1-203ENST00000428287 DOCK9Q9BZ29 2069 aa5.65□□□□□ -1.5
RIF1-203ENST00000428287 PPFIA2O75334 1257 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 GCKP35557 465 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 HAND2P61296 217 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 GUCY2DQ02846 1103 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 PARP6Q2NL67 630 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 EARS2Q5JPH6 523 aaKnown RBP5.65□□□□□ -1.51
RIF1-203ENST00000428287 CCDC63Q8NA47 563 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 PABPC3Q9H361 631 aaKnown RBP5.65□□□□□ -1.51
RIF1-203ENST00000428287 EXOC1Q9NV70 894 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 ZNF646O15015 1829 aaPredicted RBP5.65□□□□□ -1.51
RIF1-203ENST00000428287 TNRQ92752 1358 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 ECE2O60344 883 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 BAG3O95817 575 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 CCNE1P24864 410 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 ANXA13P27216 316 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 PMS1P54277 932 aaKnown RBP5.65□□□□□ -1.51
RIF1-203ENST00000428287 ERVK-9P63128 1117 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 SLC18A3Q16572 532 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 DPY19L2Q6NUT2 758 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 NFRKBQ6P4R8 1299 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 EZH1Q92800 747 aaPredicted RBP5.65□□□□□ -1.51
RIF1-203ENST00000428287 HVCN1Q96D96 273 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 PHF20Q9BVI0 1012 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 FAM129AQ9BZQ8 928 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 TBC1D30Q9Y2I9 924 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 E7ENQ6 273 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 E7EVH7 732 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 CSF1RP07333 972 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 CASP1P29466 404 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 LONP1P36776 959 aaKnown RBP5.65□□□□□ -1.51
RIF1-203ENST00000428287 FOSBP53539 338 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 BNIP1Q12981 228 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 SKIDA1Q1XH10 827 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 USP38Q8NB14 1042 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 MICAL1Q8TDZ2 1067 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms