RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 USP17L18D6R9N7 530 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 USP17L22D6RA61 530 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 USP17L17D6RBQ6 530 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 USP17L19D6RCP7 530 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 USP17L20D6RJB6 530 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 USP8P40818 1118 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 LIG3P49916 1009 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 USP17L24Q0WX57 530 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 FUT2Q10981 343 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 RNF187Q5TA31 235 aaPredicted RBP14.83□□□□□ -0.04
USP42-203ENST00000426246 PDXDC2PQ6P474 469 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 USP17L6PQ6QN14 398 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 SPICE1Q8N0Z3 855 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 P2RX5Q93086 422 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 NUDT12Q9BQG2 462 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 CDKAL1Q5VV42 579 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 KRT79Q5XKE5 535 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 LRRC1Q9BTT6 524 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 NAA15Q9BXJ9 866 aaKnown RBP14.83□□□□□ -0.04
USP42-203ENST00000426246 CAPN6Q9Y6Q1 641 aa14.83□□□□□ -0.04
USP42-203ENST00000426246 GOLGA6BA6NDN3 693 aa14.82□□□□□ -0.04
USP42-203ENST00000426246 MYO1CO00159 1063 aa14.82□□□□□ -0.04
USP42-203ENST00000426246 STAT3P40763 770 aa14.82□□□□□ -0.04
USP42-203ENST00000426246 TMEM266Q2M3C6 531 aa14.82□□□□□ -0.04
USP42-203ENST00000426246 MAP9Q49MG5 647 aa14.82□□□□□ -0.04
USP42-203ENST00000426246 AFAP1L1Q8TED9 768 aa14.82□□□□□ -0.04
USP42-203ENST00000426246 CNKSR1Q969H4 720 aa14.82□□□□□ -0.04
USP42-203ENST00000426246 SPAG5Q96R06 1193 aa14.82□□□□□ -0.04
USP42-203ENST00000426246 ADAMTS1Q9UHI8 967 aa14.82□□□□□ -0.04
USP42-203ENST00000426246 PDE2AO00408 941 aaPredicted RBP14.82□□□□□ -0.04
USP42-203ENST00000426246 DDAH1O94760 285 aa14.82□□□□□ -0.04
USP42-203ENST00000426246 DBNDD1Q9H9R9 158 aa14.82□□□□□ -0.04
USP42-203ENST00000426246 GOPCQ9HD26 462 aa14.82□□□□□ -0.04
USP42-203ENST00000426246 DMGDHQ9UI17 866 aaKnown RBP14.82□□□□□ -0.04
USP42-203ENST00000426246 SCAF8Q9UPN6 1271 aaKnown RBP14.82□□□□□ -0.04
USP42-203ENST00000426246 REXO2Q9Y3B8 237 aaKnown RBP14.82□□□□□ -0.04
USP42-203ENST00000426246 RRP15Q9Y3B9 282 aaKnown RBP14.82□□□□□ -0.04
USP42-203ENST00000426246 GOLGA6CA6NDK9 693 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 LRRC53A6NM62 1247 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 GOLGA6DP0CG33 693 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 ZNF76P36508 570 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 DNM2P50570 870 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 HERVK_113P62684 666 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 APTXQ7Z2E3 356 aaKnown RBP14.81□□□□□ -0.04
USP42-203ENST00000426246 PODNQ7Z5L7 613 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 NEK8Q86SG6 692 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 GOLGA6AQ9NYA3 693 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 GREB1LQ9C091 1923 aaPredicted RBP14.81□□□□□ -0.04
USP42-203ENST00000426246 LGALS16A8MUM7 142 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 E9PMD0 336 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 LONP1P36776 959 aaKnown RBP14.81□□□□□ -0.04
USP42-203ENST00000426246 ARHGAP25P42331 645 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 NPY5RQ15761 445 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 IRF2BP1Q8IU81 584 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 ADSSL1Q8N142 457 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 SH2D3AQ9BRG2 576 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 KIAA1024Q9UPX6 916 aa14.81□□□□□ -0.04
USP42-203ENST00000426246 CDK8P49336 464 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 AMPD3Q01432 767 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 GUCY2DQ02846 1103 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 NAALADL2Q58DX5 795 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 DACT2Q5SW24 774 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 FAM133AQ8N9E0 248 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 CCDC113Q9H0I3 377 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 RASSF4Q9H2L5 321 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 HAUS4Q9H6D7 363 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 ZBTB21Q9ULJ3 1066 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 ACTN2P35609 894 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 WHAMMP3Q1A5X7 153 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 APOBEC3HQ6NTF7 200 aaKnown RBP14.8□□□□□ -0.04
USP42-203ENST00000426246 LSM14BQ9BX40 385 aaKnown RBP14.8□□□□□ -0.04
USP42-203ENST00000426246 MYH8P13535 1937 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 TMEM110-MUSTN1A8MSY1 372 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 CLIC2O15247 247 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 KIF11P52732 1056 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 FKBP1AP62942 108 aaKnown RBP14.8□□□□□ -0.04
USP42-203ENST00000426246 E2F4Q16254 413 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 C8orf74Q6P047 294 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 ALS2CR12Q96Q35 445 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 TRIM9Q9C026 710 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 DDX4Q9NQI0 724 aaKnown RBP14.8□□□□□ -0.04
USP42-203ENST00000426246 PCDHB13Q9Y5F0 798 aa14.8□□□□□ -0.04
USP42-203ENST00000426246 ABCB4P21439 1286 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 PABPC4Q13310 644 aaKnown RBP eCLIP14.79□□□□□ -0.04
USP42-203ENST00000426246 SF3B2Q13435 895 aaKnown RBP14.79□□□□□ -0.04
USP42-203ENST00000426246 C16orf86Q6ZW13 317 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 LRRC15Q8TF66 581 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 SLC16A10Q8TF71 515 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 TBC1D5Q92609 795 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 ANKS1AQ92625 1134 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 SELENOOQ9BVL4 669 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 ECE2O60344 883 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 GNA11P29992 359 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 SLC1A4P43007 532 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 KRT12Q99456 494 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 AP1M1Q9BXS5 423 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 NDST4Q9H3R1 872 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 L1RE1Q9UN81 338 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 YDJCA8MPS7 323 aa14.79□□□□□ -0.04
USP42-203ENST00000426246 SLC37A4O43826 429 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 290.7 ms