RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 AUHQ13825 339 aaKnown RBP4.53□□□□□ -1.68
SF3B1-205ENST00000424674 SIM2Q14190 667 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-205ENST00000424674 FAM102BQ5T8I3 360 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 ERAP2Q6P179 960 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 CRTC3Q6UUV7 619 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 GET4Q7L5D6 327 aaPredicted RBP4.53□□□□□ -1.68
SF3B1-205ENST00000424674 NECAB2Q7Z6G3 386 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 ANKRD42Q8N9B4 389 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 ZSWIM2Q8NEG5 633 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 SECISBP2LQ93073 1101 aaKnown RBP4.53□□□□□ -1.68
SF3B1-205ENST00000424674 DHRS1Q96LJ7 313 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 TTC14Q96N46 770 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 FERD3LQ96RJ6 166 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 HERPUD2Q9BSE4 406 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 SELENOOQ9BVL4 669 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 ASPSCR1Q9BZE9 553 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 PTPRHQ9HD43 1115 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 ERVK13-1Q9NX77 482 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 TNFRSF10DQ9UBN6 386 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 SUCOQ9UBS9 1254 aaKnown RBP4.53□□□□□ -1.68
SF3B1-205ENST00000424674 TAF6LQ9Y6J9 622 aa4.53□□□□□ -1.68
SF3B1-205ENST00000424674 KDM2BQ8NHM5 1336 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 FADS2P1A8MWK0 482 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 PRRT4C9JH25 899 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 HRKO00198 91 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 ZNF205O95201 554 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 CT47B1P0C2W7 299 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-205ENST00000424674 ACRP10323 421 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 TRIM27P14373 513 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 PNLIPP16233 465 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 DDIT3P35638 169 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 CTSKP43235 329 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 GEMIN4P57678 1058 aaKnown RBP4.52□□□□□ -1.69
SF3B1-205ENST00000424674 ZYXQ15942 572 aaKnown RBP4.52□□□□□ -1.69
SF3B1-205ENST00000424674 HSF5Q4G112 596 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-205ENST00000424674 HYIQ5T013 277 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 FAM83BQ5T0W9 1011 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 CC2D1AQ6P1N0 951 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-205ENST00000424674 GALNT18Q6P9A2 607 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 KRT77Q7Z794 578 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 ZNF354CQ86Y25 554 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 CREBRFQ8IUR6 639 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 PASD1Q8IV76 773 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 C7orf61Q8IZ16 206 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 TAB3Q8N5C8 712 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-205ENST00000424674 CELF2-AS1Q8N7Q2 184 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 MAGEB6Q8N7X4 407 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 PPHLN1Q8NEY8 458 aaKnown RBP4.52□□□□□ -1.69
SF3B1-205ENST00000424674 SMARCC1Q92922 1105 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-205ENST00000424674 ZNF669Q96BR6 464 aaPredicted RBP4.52□□□□□ -1.69
SF3B1-205ENST00000424674 DSCC1Q9BVC3 393 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 CDADC1Q9BWV3 514 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 SGPP1Q9BX95 441 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 CSRNP2Q9H175 543 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 GCM1Q9NP62 436 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 NGRNQ9NPE2 291 aaKnown RBP4.52□□□□□ -1.69
SF3B1-205ENST00000424674 LUZP4Q9P127 313 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 POLG2Q9UHN1 485 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 USP25Q9UHP3 1055 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 KCNG1Q9UIX4 513 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 CNOT6Q9ULM6 557 aaKnown RBP4.52□□□□□ -1.69
SF3B1-205ENST00000424674 MAPRE3Q9UPY8 281 aa4.52□□□□□ -1.69
SF3B1-205ENST00000424674 CLSPNQ9HAW4 1339 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 RASSF10A6NK89 507 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 C9IYK1 514 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 RFXAPO00287 272 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 SHOXO15266 292 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 CBFA2T2O43439 604 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 PDE8AO60658 829 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 HIP1RO75146 1068 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 RAPGEF3O95398 923 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 GSNP06396 782 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 ERVFRD-1P60508 538 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 FXNQ16595 210 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 CCDC96Q2M329 555 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 TBC1D10BQ4KMP7 808 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-205ENST00000424674 TDRD10Q5VZ19 366 aaKnown RBP4.51□□□□□ -1.69
SF3B1-205ENST00000424674 OLFML2BQ68BL8 750 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 INTS3Q68E01 1043 aaKnown RBP4.51□□□□□ -1.69
SF3B1-205ENST00000424674 TTLL10Q6ZVT0 673 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 SLCO6A1Q86UG4 719 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 ZBTB46Q86UZ6 589 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 CCDC144CPQ8IYA2 1237 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 OR6P1Q8NGX9 317 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 CHMP4CQ96CF2 233 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 ERP27Q96DN0 273 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 SHDQ96IW2 340 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 SCLT1Q96NL6 688 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 TM9SF2Q99805 663 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 PRDM11Q9NQV5 511 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 AASDHPPTQ9NRN7 309 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 AP5S1Q9NUS5 200 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 RAPGEFL1Q9UHV5 662 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 PUF60Q9UHX1 559 aaKnown RBP4.51□□□□□ -1.69
SF3B1-205ENST00000424674 MBD1Q9UIS9 605 aaPredicted RBP4.51□□□□□ -1.69
SF3B1-205ENST00000424674 DAAM1Q9Y4D1 1078 aa4.51□□□□□ -1.69
SF3B1-205ENST00000424674 A0A1W2PQ45 241 aaPredicted RBP4.5□□□□□ -1.69
SF3B1-205ENST00000424674 A0A1W2PQY0 241 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 DYTNA2CJ06 578 aa4.5□□□□□ -1.69
SF3B1-205ENST00000424674 WTIPA6NIX2 430 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms