RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 NAPGQ99747 312 aaPredicted RBP5.39□□□□□ -1.55
ITGB1-205ENST00000423113 CRNKL1Q9BZJ0 848 aaKnown RBP5.39□□□□□ -1.55
ITGB1-205ENST00000423113 MMADHCQ9H3L0 296 aaPredicted RBP5.39□□□□□ -1.55
ITGB1-205ENST00000423113 ACTR5Q9H9F9 607 aaPredicted RBP5.39□□□□□ -1.55
ITGB1-205ENST00000423113 ATP6V0A4Q9HBG4 840 aa5.39□□□□□ -1.55
ITGB1-205ENST00000423113 HOMER3Q9NSC5 361 aa5.39□□□□□ -1.55
ITGB1-205ENST00000423113 NYAP2Q9P242 653 aa5.39□□□□□ -1.55
ITGB1-205ENST00000423113 ZNF219Q9P2Y4 722 aaPredicted RBP5.39□□□□□ -1.55
ITGB1-205ENST00000423113 ZNF232Q9UNY5 417 aa5.39□□□□□ -1.55
ITGB1-205ENST00000423113 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.39□□□□□ -1.55
ITGB1-205ENST00000423113 USH1CQ9Y6N9 552 aa5.39□□□□□ -1.55
ITGB1-205ENST00000423113 A0A0G2JLL6 359 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 A6NNZ2 444 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 EIF3HO15372 352 aaKnown RBP eCLIP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 DIAPH2O60879 1101 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 ATP6V1G1O75348 118 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 USP2O75604 605 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 HOXA7P31268 230 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 RAB27AP51159 221 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 SCNN1BP51168 640 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 DIXDC1Q155Q3 683 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 TUBB8Q3ZCM7 444 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 AKNAD1Q5T1N1 836 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 CFAP58Q5T655 872 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 SYNE3Q6ZMZ3 975 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 PRRT2Q7Z6L0 340 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 CCDC13Q8IYE1 715 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 NEDD1Q8NHV4 660 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 GMCL1Q96IK5 515 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 CCDC17Q96LX7 622 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 FAM227BQ96M60 508 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 CCDC85AQ96PX6 553 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 IRX2Q9BZI1 471 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 NOP53Q9NZM5 478 aaKnown RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 TRPC6Q9Y210 931 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 GOLGA6L10A0A0M3HER8 536 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 SPDYE5A6NIY4 337 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 LRRIQ3A6PVS8 624 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 H7C1D1 291 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 DDNO94850 711 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 LUC7L3O95232 432 aaKnown RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 RASA1P20936 1047 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 EPS15P42566 896 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 MAP7D1Q3KQU3 841 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 BLOC1S2Q6QNY1 142 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 GSPT2Q8IYD1 628 aaKnown RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 DRAXINQ8NBI3 349 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 FAM81AQ8TBF8 368 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 BORCS6Q96GS4 357 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 BOLA2Q9H3K6 86 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 CNNM2Q9H8M5 875 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 RRAGCQ9HB90 399 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 CREBZFQ9NS37 354 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 RHBDL2Q9NX52 303 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 PI4KBQ9UBF8 816 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 AFG3L2Q9Y4W6 797 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 SNCAIPQ9Y6H5 919 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 STK36Q9NRP7 1315 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 RBM47A0AV96 593 aaKnown RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 GOLGA8KD6RF30 607 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 CETN3O15182 167 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 LGR5O75473 907 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 SLC10A3P09131 477 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 FERP16591 822 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 PSMA5P28066 241 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 TM4SF4P48230 202 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 CTCFP49711 727 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 PPIL2Q13356 520 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 RRP1BQ14684 758 aaKnown RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 IQCB1Q15051 598 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 PPP2R5BQ15173 497 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 LONRF3Q496Y0 759 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 CCDC92Q53HC0 331 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-205ENST00000423113 TCERG1LQ5VWI1 586 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 CST9Q5W186 159 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 IQCEQ6IPM2 695 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 CACNA2D3Q8IZS8 1091 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 REPS2Q8NFH8 660 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 TEKT4Q8WW24 435 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 STAMBPL1Q96FJ0 436 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 OSBPL1AQ9BXW6 950 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 NMRK2Q9NPI5 230 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.38□□□□□ -1.558e-7■■■■■ 149.1
ITGB1-205ENST00000423113 GUCA1BQ9UMX6 200 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 STK38LQ9Y2H1 464 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 TCHHQ07283 1943 aa5.38□□□□□ -1.55
ITGB1-205ENST00000423113 CEP104O60308 925 aa5.37□□□□□ -1.55
ITGB1-205ENST00000423113 PDHA1P08559 390 aa5.37□□□□□ -1.55
ITGB1-205ENST00000423113 TNNI2P48788 182 aa5.37□□□□□ -1.55
ITGB1-205ENST00000423113 ANTXR2P58335 489 aa5.37□□□□□ -1.55
ITGB1-205ENST00000423113 FUT2Q10981 343 aa5.37□□□□□ -1.55
ITGB1-205ENST00000423113 CCDC96Q2M329 555 aa5.37□□□□□ -1.55
ITGB1-205ENST00000423113 RASIP1Q5U651 963 aa5.37□□□□□ -1.55
ITGB1-205ENST00000423113 STOX1Q6ZVD7 989 aa5.37□□□□□ -1.55
ITGB1-205ENST00000423113 TBC1D1Q86TI0 1168 aaPredicted RBP5.37□□□□□ -1.55
ITGB1-205ENST00000423113 DGKHQ86XP1 1220 aa5.37□□□□□ -1.55
ITGB1-205ENST00000423113 MFN1Q8IWA4 741 aa5.37□□□□□ -1.55
ITGB1-205ENST00000423113 SLC35F6Q8N357 371 aa5.37□□□□□ -1.55
ITGB1-205ENST00000423113 TMTC2Q8N394 836 aa5.37□□□□□ -1.55
ITGB1-205ENST00000423113 KCNV2Q8TDN2 545 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms