RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 RTP3Q9BQQ7 232 aa14.23□□□□□ -0.13
UFD1-203ENST00000421968 CDV3Q9UKY7 258 aaKnown RBP14.23□□□□□ -0.13
UFD1-203ENST00000421968 MYH4Q9Y623 1939 aa14.22□□□□□ -0.13
UFD1-203ENST00000421968 TMEM232C9JQI7 657 aa14.22□□□□□ -0.13
UFD1-203ENST00000421968 PER2O15055 1255 aa14.22□□□□□ -0.13
UFD1-203ENST00000421968 PRKAB2O43741 272 aa14.22□□□□□ -0.13
UFD1-203ENST00000421968 ITGB1P05556 798 aa14.22□□□□□ -0.13
UFD1-203ENST00000421968 MMP3P08254 477 aa14.22□□□□□ -0.13
UFD1-203ENST00000421968 CASTP20810 708 aaKnown RBP14.22□□□□□ -0.13
UFD1-203ENST00000421968 IKQ13123 557 aaPredicted RBP14.22□□□□□ -0.13
UFD1-203ENST00000421968 BTG3Q14201 252 aaPredicted RBP14.22□□□□□ -0.13
UFD1-203ENST00000421968 SLC9C2Q5TAH2 1124 aa14.22□□□□□ -0.13
UFD1-203ENST00000421968 ZC3H14Q6PJT7 736 aaKnown RBP14.22□□□□□ -0.13
UFD1-203ENST00000421968 P2RX5Q93086 422 aa14.22□□□□□ -0.13
UFD1-203ENST00000421968 APOL5Q9BWW9 433 aa14.22□□□□□ -0.13
UFD1-203ENST00000421968 DBNLQ9UJU6 430 aaKnown RBP14.22□□□□□ -0.13
UFD1-203ENST00000421968 LOC102724159A0A0B4J2E5 919 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 ASGR2P07307 311 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 BMP3P12645 472 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 PDE6AP16499 860 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 PSEN2P49810 448 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 STAT2P52630 851 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 PDE4DQ08499 809 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 OS9Q13438 667 aaPredicted RBP14.21□□□□□ -0.13
UFD1-203ENST00000421968 BAATQ14032 418 aaPredicted RBP14.21□□□□□ -0.13
UFD1-203ENST00000421968 PWP2Q15269 919 aaKnown RBP14.21□□□□□ -0.13
UFD1-203ENST00000421968 RPAP2Q8IXW5 612 aaPredicted RBP14.21□□□□□ -0.13
UFD1-203ENST00000421968 VN1R2Q8NFZ6 395 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 ATP8B4Q8TF62 1192 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 POF1BQ8WVV4 589 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 RIN2Q8WYP3 895 aaPredicted RBP14.21□□□□□ -0.13
UFD1-203ENST00000421968 S1PR5Q9H228 398 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 ARMT1Q9H993 441 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 ATP8A2Q9NTI2 1148 aa14.21□□□□□ -0.13
UFD1-203ENST00000421968 TLR7Q9NYK1 1049 aaKnown RBP14.21□□□□□ -0.13
UFD1-203ENST00000421968 ZNF532Q9HCE3 1301 aa14.2□□□□□ -0.14
UFD1-203ENST00000421968 GREB1LQ9C091 1923 aaPredicted RBP14.2□□□□□ -0.14
UFD1-203ENST00000421968 C2CD4DB7Z1M9 353 aa14.2□□□□□ -0.14
UFD1-203ENST00000421968 GNAI3P08754 354 aa14.2□□□□□ -0.14
UFD1-203ENST00000421968 NPR3P17342 541 aa14.2□□□□□ -0.14
UFD1-203ENST00000421968 SNAP25P60880 206 aa14.2□□□□□ -0.14
UFD1-203ENST00000421968 NAALADL2Q58DX5 795 aa14.2□□□□□ -0.14
UFD1-203ENST00000421968 DHX37Q8IY37 1157 aaKnown RBP14.2□□□□□ -0.14
UFD1-203ENST00000421968 MICAL1Q8TDZ2 1067 aa14.2□□□□□ -0.14
UFD1-203ENST00000421968 RTKNQ9BST9 563 aa14.2□□□□□ -0.14
UFD1-203ENST00000421968 CCDC8Q9H0W5 538 aaPredicted RBP14.2□□□□□ -0.14
UFD1-203ENST00000421968 PNMA6EA0A0J9YXQ4 647 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 PRR5-ARHGAP8B1AHC4 643 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 ARIH2O95376 493 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 ARHGAP8P85298 464 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 MFSD10Q14728 455 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 KIAA0753Q2KHM9 967 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 SLFN13Q68D06 897 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 CHST3Q7LGC8 479 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 FAM160B2Q86V87 743 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 KLHL23Q8NBE8 558 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 CHURC1Q8WUH1 139 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 KATNAL1Q9BW62 490 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 OSBPL7Q9BZF2 842 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 RC3H2Q9HBD1 1191 aaKnown RBP14.19□□□□□ -0.14
UFD1-203ENST00000421968 NCDNQ9UBB6 729 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 CCPG1Q9ULG6 757 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 FANCMQ8IYD8 2048 aa14.19□□□□□ -0.14
UFD1-203ENST00000421968 PTPDC1A2A3K4 754 aa14.18□□□□□ -0.14
UFD1-203ENST00000421968 SRGAP2BP0DMP2 458 aa14.18□□□□□ -0.14
UFD1-203ENST00000421968 TECP42680 631 aa14.18□□□□□ -0.14
UFD1-203ENST00000421968 DGKDQ16760 1214 aa14.18□□□□□ -0.14
UFD1-203ENST00000421968 CCDC184Q52MB2 194 aa14.18□□□□□ -0.14
UFD1-203ENST00000421968 GPR161Q8N6U8 529 aaKnown RBP14.18□□□□□ -0.14
UFD1-203ENST00000421968 APBB2Q92870 758 aa14.18□□□□□ -0.14
UFD1-203ENST00000421968 CHMP4CQ96CF2 233 aa14.18□□□□□ -0.14
UFD1-203ENST00000421968 DDRGK1Q96HY6 314 aa14.18□□□□□ -0.14
UFD1-203ENST00000421968 MPHOSPH6Q99547 160 aaKnown RBP14.18□□□□□ -0.14
UFD1-203ENST00000421968 CEP295Q9C0D2 2601 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 FSD2A1L4K1 749 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 GH1P01241 217 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 CTSHP09668 335 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 RASA1P20936 1047 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 LMNB2Q03252 620 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 ANKRD54Q6NXT1 300 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 SYCE2Q6PIF2 218 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 SERINC5Q86VE9 423 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 CRIPAKQ8N1N5 446 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 SUMF1Q8NBK3 374 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 GMCL1P1Q8NEA9 526 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 STAG1Q8WVM7 1258 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 CDCA3Q99618 268 aaPredicted RBP14.17□□□□□ -0.14
UFD1-203ENST00000421968 MKNK2Q9HBH9 465 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 SMC4Q9NTJ3 1288 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 LIMD1Q9UGP4 676 aa14.17□□□□□ -0.14
UFD1-203ENST00000421968 MRPL42Q9Y6G3 142 aaKnown RBP14.17□□□□□ -0.14
UFD1-203ENST00000421968 CNOT1A5YKK6 2376 aaKnown RBP14.16□□□□□ -0.14
UFD1-203ENST00000421968 SOBPA7XYQ1 873 aa14.16□□□□□ -0.14
UFD1-203ENST00000421968 STK25O00506 426 aa14.16□□□□□ -0.14
UFD1-203ENST00000421968 PPFIA3O75145 1194 aa14.16□□□□□ -0.14
UFD1-203ENST00000421968 MBD4O95243 580 aa14.16□□□□□ -0.14
UFD1-203ENST00000421968 ZNF286BP0CG31 522 aa14.16□□□□□ -0.14
UFD1-203ENST00000421968 CALML3P27482 149 aa14.16□□□□□ -0.14
UFD1-203ENST00000421968 ARHGAP1Q07960 439 aa14.16□□□□□ -0.14
UFD1-203ENST00000421968 HIC1Q14526 733 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms