RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 PIGOQ8TEQ8 1089 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 CRYGNQ8WXF5 182 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 ZNF341Q9BYN7 854 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 CUEDC2Q9H467 287 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 SPON1Q9HCB6 807 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 ARHGEF10LQ9HCE6 1279 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 MAGEC2Q9UBF1 373 aaPredicted RBP9.81□□□□□ -0.84
SNCA-206ENST00000420646 EPHB6O15197 1021 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 PLA2G4BP0C869 781 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 CAP2P40123 477 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 CASP5P51878 434 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 SPIRE1Q08AE8 756 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 TBC1D8BQ0IIM8 1120 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 ELF2Q15723 593 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 ERCC6LQ2NKX8 1250 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 DALRD3Q5D0E6 543 aaKnown RBP9.81□□□□□ -0.84
SNCA-206ENST00000420646 ARSHQ5FYA8 562 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 UNC13DQ70J99 1090 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 GPBP1Q86WP2 473 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 ZNF507Q8TCN5 953 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 JDP2Q8WYK2 163 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 ZBTB9Q96C00 473 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 DHTKD1Q96HY7 919 aaPredicted RBP9.81□□□□□ -0.84
SNCA-206ENST00000420646 PURBQ96QR8 312 aaKnown RBP9.81□□□□□ -0.84
SNCA-206ENST00000420646 FEZ1Q99689 392 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 NOC4LQ9BVI4 516 aaKnown RBP9.81□□□□□ -0.84
SNCA-206ENST00000420646 TAOK3Q9H2K8 898 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 KCND1Q9NSA2 647 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 ADGRG1Q9Y653 693 aa9.81□□□□□ -0.84
SNCA-206ENST00000420646 LGALS16A8MUM7 142 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 RSPH10B2B2RC85 870 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 RSPH10BP0C881 870 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 YY1P25490 414 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 COASYQ13057 564 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 HERC4Q5GLZ8 1057 aaPredicted RBP9.8□□□□□ -0.84
SNCA-206ENST00000420646 MIIPQ5JXC2 388 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 CIAPIN1Q6FI81 312 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 CNNM4Q6P4Q7 775 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 WDR18Q9BV38 432 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 ZSWIM4Q9H7M6 989 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 PANK4Q9NVE7 773 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 DDX39AO00148 427 aaKnown RBP9.8□□□□□ -0.84
SNCA-206ENST00000420646 MYL1P05976 194 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 SPATA31C1P0DKV0 1188 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 USP11P51784 963 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 CTTNQ14247 550 aaKnown RBP9.8□□□□□ -0.84
SNCA-206ENST00000420646 CCDC47Q96A33 483 aaKnown RBP9.8□□□□□ -0.84
SNCA-206ENST00000420646 PANX2Q96RD6 677 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 SH2D3AQ9BRG2 576 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 FAM207AQ9NSI2 230 aaPredicted RBP9.8□□□□□ -0.84
SNCA-206ENST00000420646 STK17AQ9UEE5 414 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 ZSCAN12O43309 604 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 KRT18P05783 430 aaKnown RBP9.8□□□□□ -0.84
SNCA-206ENST00000420646 TRIM21P19474 475 aaKnown RBP9.8□□□□□ -0.84
SNCA-206ENST00000420646 SPAG1Q07617 926 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 THAP9Q9H5L6 903 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 PGAP2Q9UHJ9 254 aa9.8□□□□□ -0.84
SNCA-206ENST00000420646 DNAH12Q6ZR08 3092 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 PLEKP08567 350 aaPredicted RBP9.79□□□□□ -0.84
SNCA-206ENST00000420646 GCFC2P16383 781 aaKnown RBP9.79□□□□□ -0.84
SNCA-206ENST00000420646 CYP11B2P19099 503 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 SREBF1P36956 1147 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 KCNJ6P48051 423 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 KCNA1Q09470 495 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 PRKG1Q13976 671 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 CENPPQ6IPU0 288 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 BTNL9Q6UXG8 535 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 CNGA4Q8IV77 575 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 CRACR2AQ9BSW2 395 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 BHMT2Q9H2M3 363 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 VCPKMTQ9H867 229 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 NFIBO00712 420 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 CCDC175P0C221 793 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 PPP4R3BQ5MIZ7 849 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 NBPF12Q5TAG4 269 aaPredicted RBP9.79□□□□□ -0.84
SNCA-206ENST00000420646 WDR59Q6PJI9 974 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 LDHDQ86WU2 507 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 MICALL2Q8IY33 904 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 SMCR8Q8TEV9 937 aaPredicted RBP9.79□□□□□ -0.84
SNCA-206ENST00000420646 ZKSCAN4Q969J2 545 aaPredicted RBP9.79□□□□□ -0.84
SNCA-206ENST00000420646 WNK4Q96J92 1243 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 CARD6Q9BX69 1037 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 MAGEF1Q9HAY2 307 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 GOPCQ9HD26 462 aa9.79□□□□□ -0.84
SNCA-206ENST00000420646 CYP3A7-CYP3A51PA0A087WV96 503 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 DCAF8L1A6NGE4 600 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 PHF20L1A8MW92 1017 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 TRAF5O00463 557 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 ARP10275 920 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 CYP3A7P24462 503 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 EEF1GP26641 437 aaKnown RBP9.78□□□□□ -0.84
SNCA-206ENST00000420646 GMPSP49915 693 aaPredicted RBP9.78□□□□□ -0.84
SNCA-206ENST00000420646 ORC2Q13416 577 aaPredicted RBP9.78□□□□□ -0.84
SNCA-206ENST00000420646 KSR1Q8IVT5 923 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 TPH2Q8IWU9 490 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 TEPSINQ96N21 525 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 TANGO6Q9C0B7 1094 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 COL20A1Q9P218 1284 aa9.78□□□□□ -0.84
SNCA-206ENST00000420646 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms