RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 MRPL44Q9H9J2 332 aaKnown RBP16.44■□□□□ 0.22
SEMA4D-204ENST00000420101 CEP83Q9Y592 693 aa16.44■□□□□ 0.22
SEMA4D-204ENST00000420101 PCDHA1Q9Y5I3 950 aa16.44■□□□□ 0.22
SEMA4D-204ENST00000420101 PPP1R11O60927 126 aaPredicted RBP16.43■□□□□ 0.22
SEMA4D-204ENST00000420101 MRPL12P52815 198 aaKnown RBP16.43■□□□□ 0.22
SEMA4D-204ENST00000420101 VSNL1P62760 191 aa16.43■□□□□ 0.22
SEMA4D-204ENST00000420101 LETM2Q2VYF4 491 aa16.43■□□□□ 0.22
SEMA4D-204ENST00000420101 FERMT2Q96AC1 680 aa16.43■□□□□ 0.22
SEMA4D-204ENST00000420101 VCPKMTQ9H867 229 aa16.43■□□□□ 0.22
SEMA4D-204ENST00000420101 TMEM260Q9NX78 707 aa16.43■□□□□ 0.22
SEMA4D-204ENST00000420101 KCNH3Q9ULD8 1083 aa16.43■□□□□ 0.22
SEMA4D-204ENST00000420101 PHF20L1A8MW92 1017 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 CCNT1O60563 726 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 CTNND1O60716 968 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 MAP2K2P36507 400 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 TRIM14Q14142 442 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 USH1GQ495M9 461 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 FILIP1LQ4L180 1135 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 DPY19L2Q6NUT2 758 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 FBXO11Q86XK2 927 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 MTMR8Q96EF0 704 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 AMNQ9BXJ7 453 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 GLIS2Q9BZE0 524 aaPredicted RBP16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 CXorf56Q9H5V9 222 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 PSTPIP2Q9H939 334 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 RIC8AQ9NPQ8 531 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 PUF60Q9UHX1 559 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 SARSP49591 514 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 ADKP55263 362 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 ATP2C1P98194 919 aaPredicted RBP16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 KARSQ15046 597 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 UBE2SQ16763 222 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 ZNF569Q5MCW4 686 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 FOXR1Q6PIV2 292 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 MICALL1Q8N3F8 863 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 ZNF579Q8NAF0 562 aaKnown RBP16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 TBCKQ8TEA7 893 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 CHURC1Q8WUH1 139 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 NFE2L3Q9Y4A8 694 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 PCDHA5Q9Y5H7 936 aa16.42■□□□□ 0.22
SEMA4D-204ENST00000420101 N4BP1O75113 896 aaKnown RBP16.41■□□□□ 0.22
SEMA4D-204ENST00000420101 SYF2O95926 243 aaKnown RBP16.41■□□□□ 0.22
SEMA4D-204ENST00000420101 INPP5BP32019 993 aa16.41■□□□□ 0.22
SEMA4D-204ENST00000420101 HIRAP54198 1017 aaPredicted RBP16.41■□□□□ 0.22
SEMA4D-204ENST00000420101 MDM2Q00987 491 aaPredicted RBP16.41■□□□□ 0.22
SEMA4D-204ENST00000420101 CKAP4Q07065 602 aaKnown RBP16.41■□□□□ 0.22
SEMA4D-204ENST00000420101 KIAA1755Q5JYT7 1200 aa16.41■□□□□ 0.22
SEMA4D-204ENST00000420101 NEK8Q86SG6 692 aa16.41■□□□□ 0.22
SEMA4D-204ENST00000420101 WRNIP1Q96S55 665 aa16.41■□□□□ 0.22
SEMA4D-204ENST00000420101 PICK1Q9NRD5 415 aa16.41■□□□□ 0.22
SEMA4D-204ENST00000420101 ADARB2Q9NS39 739 aaKnown RBP16.41■□□□□ 0.22
SEMA4D-204ENST00000420101 PRR12Q9ULL5 1215 aa16.41■□□□□ 0.22
SEMA4D-204ENST00000420101 USP14P54578 494 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 PPFIA1Q13136 1202 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 PNOCQ13519 176 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 PRKG1Q13976 671 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 MORC3Q14149 939 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 B4GALNT4Q76KP1 1039 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 FAM76AQ8TAV0 307 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 COG1Q8WTW3 980 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 DCPSQ96C86 337 aaKnown RBP16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 GLT8D2Q9H1C3 349 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 GINM1Q9NU53 330 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 MYO6Q9UM54 1294 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 POLR2DO15514 142 aaKnown RBP16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 CLSTN1O94985 981 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 PBX1P40424 430 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 SUPT20HL1Q3ZLR7 823 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 IQCEQ6IPM2 695 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 CCDC174Q6PII3 467 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 BTNL9Q6UXG8 535 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 ZNF662Q6ZS27 426 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 PPP2R3BQ9Y5P8 575 aa16.4■□□□□ 0.22
SEMA4D-204ENST00000420101 LRRIQ3A6PVS8 624 aaPredicted RBP16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 MFAP3LO75121 409 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 AMPD2Q01433 879 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 POSTNQ15063 836 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 DTHD1Q6ZMT9 781 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 FAM160B2Q86V87 743 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 CNPY4Q8N129 248 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 EHBP1Q8NDI1 1231 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 CRACR2AQ9BSW2 395 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 LZTFL1Q9NQ48 299 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 FEM1BQ9UK73 627 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 MAN1B1Q9UKM7 699 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 HPCAL4Q9UM19 191 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 FZD1Q9UP38 647 aa16.39■□□□□ 0.21
SEMA4D-204ENST00000420101 TRAF1Q13077 416 aa16.38■□□□□ 0.21
SEMA4D-204ENST00000420101 STIM1Q13586 685 aa16.38■□□□□ 0.21
SEMA4D-204ENST00000420101 ARL6IP4Q66PJ3 421 aaKnown RBP16.38■□□□□ 0.21
SEMA4D-204ENST00000420101 CCDC70Q6NSX1 233 aa16.38■□□□□ 0.21
SEMA4D-204ENST00000420101 SULF1Q8IWU6 871 aa16.38■□□□□ 0.21
SEMA4D-204ENST00000420101 SCYL3Q8IZE3 742 aa16.38■□□□□ 0.21
SEMA4D-204ENST00000420101 RASSF8Q8NHQ8 419 aa16.38■□□□□ 0.21
SEMA4D-204ENST00000420101 SYMPKQ92797 1274 aaKnown RBP16.38■□□□□ 0.21
SEMA4D-204ENST00000420101 SECISBP2LQ93073 1101 aaKnown RBP16.38■□□□□ 0.21
SEMA4D-204ENST00000420101 ZKSCAN4Q969J2 545 aaPredicted RBP16.38■□□□□ 0.21
SEMA4D-204ENST00000420101 EPSTI1Q96J88 318 aa16.38■□□□□ 0.21
SEMA4D-204ENST00000420101 DESI2Q9BSY9 194 aa16.38■□□□□ 0.21
SEMA4D-204ENST00000420101 AS3MTQ9HBK9 375 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms