RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 RSAD2Q8WXG1 361 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 DYNLL2Q96FJ2 89 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 TMEM206Q9H813 350 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 PIH1D3Q9NQM4 214 aaKnown RBP9.24□□□□□ -0.93
UBR4-206ENST00000419533 TYW5A2RUC4 315 aaKnown RBP9.24□□□□□ -0.93
UBR4-206ENST00000419533 SH2B2O14492 632 aaPredicted RBP9.24□□□□□ -0.93
UBR4-206ENST00000419533 HOXA7P31268 230 aaPredicted RBP9.24□□□□□ -0.93
UBR4-206ENST00000419533 SLC12A2P55011 1212 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 FYB2Q5VWT5 728 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 CCDC121Q6ZUS5 278 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 PPM1KQ8N3J5 372 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 OR8K1Q8NGG5 319 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 CCDC110Q8TBZ0 833 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 NLRP7Q8WX94 980 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 ADARB2Q9NS39 739 aaKnown RBP9.24□□□□□ -0.93
UBR4-206ENST00000419533 MTMR6Q9Y217 621 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 ABCC12Q96J65 1359 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 EVCP57679 992 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 RSBN1LQ6PCB5 846 aaPredicted RBP9.24□□□□□ -0.93
UBR4-206ENST00000419533 SLF1Q9BQI6 1058 aa9.24□□□□□ -0.93
UBR4-206ENST00000419533 MYL7Q01449 175 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 GABPB1Q06547 395 aaPredicted RBP9.23□□□□□ -0.93
UBR4-206ENST00000419533 IFRD2Q12894 506 aaPredicted RBP9.23□□□□□ -0.93
UBR4-206ENST00000419533 FAM76AQ8TAV0 307 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 GRK7Q8WTQ7 553 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 NT5C1BQ96P26 610 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 STK17AQ9UEE5 414 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 PCDHA7Q9UN72 937 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 ATP8B3O60423 1300 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 PTK2Q05397 1052 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 PI16Q6UXB8 463 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 OSBP2Q969R2 916 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 GPR101Q96P66 508 aaPredicted RBP9.23□□□□□ -0.93
UBR4-206ENST00000419533 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.23□□□□□ -0.937e-7■■□□□ 11.8
UBR4-206ENST00000419533 V9GYY5 206 aaPredicted RBP9.23□□□□□ -0.93
UBR4-206ENST00000419533 A0A1W2PQ27 194 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 A0A1W2PQ64 194 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 A0A1W2PQD8 194 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 PFDN6O15212 129 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 SASH1O94885 1247 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 LONRF2Q1L5Z9 754 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 NBPF11Q86T75 865 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 ZNF589Q86UQ0 364 aaPredicted RBP9.23□□□□□ -0.93
UBR4-206ENST00000419533 SPATA24Q86W54 205 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 DGKHQ86XP1 1220 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 VPS52Q8N1B4 723 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 SNX25Q9H3E2 840 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 PFDN4Q9NQP4 134 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 HOXD10P28358 340 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 EPHX2P34913 555 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 PSMC2P35998 433 aaKnown RBP9.23□□□□□ -0.93
UBR4-206ENST00000419533 GMPSP49915 693 aaPredicted RBP9.23□□□□□ -0.93
UBR4-206ENST00000419533 PPP1R2P3Q6NXS1 205 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 USP17L2Q6R6M4 530 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 RNF207Q6ZRF8 634 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 GJA10Q969M2 543 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 RAB17Q9H0T7 212 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 IFT122Q9HBG6 1241 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 FEM1BQ9UK73 627 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 USP17L5A8MUK1 530 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 RNF8O76064 485 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 MYL1P05976 194 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 NSFP46459 744 aaKnown RBP9.23□□□□□ -0.93
UBR4-206ENST00000419533 MNAT1P51948 309 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 PPP2R5EQ16537 467 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 SPATA1Q5VX52 437 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 KIAA1841Q6NSI8 718 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 GIMAP8Q8ND71 665 aaPredicted RBP9.23□□□□□ -0.93
UBR4-206ENST00000419533 ERO1AQ96HE7 468 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 DISC1Q9NRI5 854 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 LMBRD1Q9NUN5 540 aa9.23□□□□□ -0.93
UBR4-206ENST00000419533 PAK2Q13177 524 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 MTMR3Q13615 1198 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 SLC39A14Q15043 492 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 Q3C1V9 767 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 KLHL7Q8IXQ5 586 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 COA7Q96BR5 231 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 GSDMAQ96QA5 445 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 TRIM31Q9BZY9 425 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 CLIC4Q9Y696 253 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 TOPAZ1Q8N9V7 1692 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 GH2P01242 217 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 GNAT1P11488 350 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 ABCB4P21439 1286 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 LIFRP42702 1097 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 AP3B2Q13367 1082 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 SEPT2Q15019 361 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 SURF1Q15526 300 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 EXOC3L4Q17RC7 722 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 TRIM58Q8NG06 486 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 MRRFQ96E11 262 aaKnown RBP9.22□□□□□ -0.93
UBR4-206ENST00000419533 CLIC6Q96NY7 704 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 MMP1P03956 469 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 IFNAR1P17181 557 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 POLR2FP61218 127 aaKnown RBP9.22□□□□□ -0.93
UBR4-206ENST00000419533 ALCAMQ13740 583 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 SH3RF3Q8TEJ3 882 aaPredicted RBP9.22□□□□□ -0.93
UBR4-206ENST00000419533 RIC8AQ9NPQ8 531 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 SH3GLB2Q9NR46 395 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 RUFY4Q6ZNE9 571 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms