RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 DNAJC18Q9H819 358 aa8.74□□□□□ -1.01
CPSF7-203ENST00000413184 SCUBE2Q9NQ36 999 aa8.74□□□□□ -1.01
CPSF7-203ENST00000413184 DBR1Q9UK59 544 aaKnown RBP8.74□□□□□ -1.01
CPSF7-203ENST00000413184 KLK13Q9UKR3 277 aa8.74□□□□□ -1.01
CPSF7-203ENST00000413184 PAXBP1Q9Y5B6 917 aa8.74□□□□□ -1.01
CPSF7-203ENST00000413184 POLQO75417 2590 aa8.74□□□□□ -1.01
CPSF7-203ENST00000413184 PI4KAP2A4QPH2 592 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 CAPN9O14815 690 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 CKBP12277 381 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 COPB2P35606 906 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 STAT3P40763 770 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 TMPOP42166 694 aaKnown RBP8.73□□□□□ -1.01
CPSF7-203ENST00000413184 MTHFRP42898 656 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 CHMP4BP1P59074 171 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 SF3A2Q15428 464 aaKnown RBP8.73□□□□□ -1.01
CPSF7-203ENST00000413184 XRRA1Q6P2D8 792 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 LMBR1LQ6UX01 489 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 KSR2Q6VAB6 950 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 TMEM184AQ6ZMB5 413 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 RUFY4Q6ZNE9 571 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 CCDC144CPQ8IYA2 1237 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 PI4KAP1Q8N8J0 262 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 CLP1Q92989 425 aaKnown RBP8.73□□□□□ -1.01
CPSF7-203ENST00000413184 ACSF2Q96CM8 615 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-203ENST00000413184 KATNBL1Q9H079 304 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 DHX36Q9H2U1 1008 aaKnown RBP8.73□□□□□ -1.01
CPSF7-203ENST00000413184 KCNK12Q9HB15 430 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 USTQ9Y2C2 406 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 LAS1LQ9Y4W2 734 aaKnown RBP8.73□□□□□ -1.01
CPSF7-203ENST00000413184 SCN10AQ9Y5Y9 1956 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 ADGRA3Q8IWK6 1321 aa8.73□□□□□ -1.01
CPSF7-203ENST00000413184 CAPNS1P04632 268 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 FOXO4P98177 505 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 ITIH3Q06033 890 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 TPRNQ4KMQ1 711 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 METTL24Q5JXM2 366 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 FOXP4Q8IVH2 680 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-203ENST00000413184 FAM133AQ8N9E0 248 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 FAM126AQ9BYI3 521 aaPredicted RBP8.72□□□□□ -1.01
CPSF7-203ENST00000413184 ADAM7Q9H2U9 754 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 BCAS3Q9H6U6 928 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 ARHGEF3Q9NR81 526 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 TRIM35Q9UPQ4 493 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 Q9Y3F1 56 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 MROH7-TTC4A0A0A0MT08 1334 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 GREB1Q4ZG55 1949 aa8.72□□□□□ -1.01
CPSF7-203ENST00000413184 EOMESO95936 686 aa8.71□□□□□ -1.02
CPSF7-203ENST00000413184 IFIT1P09914 478 aaKnown RBP8.71□□□□□ -1.02
CPSF7-203ENST00000413184 WEE2P0C1S8 567 aa8.71□□□□□ -1.02
CPSF7-203ENST00000413184 RARSP54136 660 aaKnown RBP8.71□□□□□ -1.02
CPSF7-203ENST00000413184 SCAPQ12770 1279 aa8.71□□□□□ -1.02
CPSF7-203ENST00000413184 BTG3Q14201 252 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-203ENST00000413184 NAALADL2Q58DX5 795 aa8.71□□□□□ -1.02
CPSF7-203ENST00000413184 SH3PXD2AQ5TCZ1 1133 aa8.71□□□□□ -1.02
CPSF7-203ENST00000413184 KLHL23Q8NBE8 558 aa8.71□□□□□ -1.02
CPSF7-203ENST00000413184 LSM14AQ8ND56 463 aaKnown RBP8.71□□□□□ -1.02
CPSF7-203ENST00000413184 DHX38Q92620 1227 aaKnown RBP8.71□□□□□ -1.02
CPSF7-203ENST00000413184 FAM163AQ96GL9 167 aaPredicted RBP8.71□□□□□ -1.02
CPSF7-203ENST00000413184 CRELD1Q96HD1 420 aa8.71□□□□□ -1.02
CPSF7-203ENST00000413184 RAXQ9Y2V3 346 aa8.71□□□□□ -1.02
CPSF7-203ENST00000413184 APC2O95996 2303 aa8.7□□□□□ -1.02
CPSF7-203ENST00000413184 DNAJC25-GNG10A0A024R161 153 aa8.7□□□□□ -1.02
CPSF7-203ENST00000413184 GPR75-ASB3A0A0A6YYF3 556 aa8.7□□□□□ -1.02
CPSF7-203ENST00000413184 MAFO75444 373 aaPredicted RBP8.7□□□□□ -1.02
CPSF7-203ENST00000413184 CPT1AP50416 773 aa8.7□□□□□ -1.02
CPSF7-203ENST00000413184 CFHR1Q03591 330 aa8.7□□□□□ -1.02
CPSF7-203ENST00000413184 RBL2Q08999 1139 aa8.7□□□□□ -1.02
CPSF7-203ENST00000413184 SIM2Q14190 667 aaPredicted RBP8.7□□□□□ -1.02
CPSF7-203ENST00000413184 RNF43Q68DV7 783 aa8.7□□□□□ -1.02
CPSF7-203ENST00000413184 SLC4A10Q6U841 1118 aa8.7□□□□□ -1.02
CPSF7-203ENST00000413184 SKAP1Q86WV1 359 aa8.7□□□□□ -1.02
CPSF7-203ENST00000413184 FAM181AQ8N9Y4 354 aa8.7□□□□□ -1.02
CPSF7-203ENST00000413184 CCDC86Q9H6F5 360 aaKnown RBP8.7□□□□□ -1.02
CPSF7-203ENST00000413184 MYH16Q9H6N6 1097 aa8.7□□□□□ -1.02
CPSF7-203ENST00000413184 EMSYQ7Z589 1322 aa8.7□□□□□ -1.02
CPSF7-203ENST00000413184 PPFIA3O75145 1194 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 MAP4K4O95819 1239 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-203ENST00000413184 MS4A1P11836 297 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 GP1BBP13224 206 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 NRLP54845 237 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 MBTPS1Q14703 1052 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 NONOQ15233 471 aaKnown RBP eCLIP8.69□□□□□ -1.02
CPSF7-203ENST00000413184 C4orf17Q53FE4 359 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 ZNF618Q5T7W0 954 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 DCLRE1AQ6PJP8 1040 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 CENPQQ7L2Z9 268 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-203ENST00000413184 TEX11Q8IYF3 940 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 GPR152Q8TDT2 470 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 PANK1Q8TE04 598 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
CPSF7-203ENST00000413184 PNNQ9H307 717 aaKnown RBP8.69□□□□□ -1.02
CPSF7-203ENST00000413184 IGSF9Q9P2J2 1179 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 TNNQ9UQP3 1299 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.69□□□□□ -1.02
CPSF7-203ENST00000413184 IL16Q14005 1332 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 DNHD1Q96M86 4753 aa8.69□□□□□ -1.02
CPSF7-203ENST00000413184 URB1O60287 2271 aaKnown RBP8.69□□□□□ -1.02
CPSF7-203ENST00000413184 PLXNA4Q9HCM2 1894 aa8.68□□□□□ -1.02
CPSF7-203ENST00000413184 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-203ENST00000413184 FAM205CA6NFA0 338 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms