RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CEBPAP49715 358 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-204ENST00000412061 DHX8Q14562 1220 aaKnown RBP5.81□□□□□ -1.48
BRCA1-204ENST00000412061 PCBP1Q15365 356 aaKnown RBP eCLIP5.81□□□□□ -1.48
BRCA1-204ENST00000412061 FAM47CQ5HY64 1035 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 PIK3R6Q5UE93 754 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 PKN3Q6P5Z2 889 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 ZNF574Q6ZN55 896 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-204ENST00000412061 DTX1Q86Y01 620 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 AFAP1L2Q8N4X5 818 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 SAMD3Q8N6K7 520 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 ANKS4BQ8N8V4 417 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 FLCNQ8NFG4 579 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 PCDH19Q8TAB3 1148 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 CCDC120Q96HB5 630 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 WNK4Q96J92 1243 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 ASPSCR1Q9BZE9 553 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 MTFR1LQ9H019 292 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 ADAMTS10Q9H324 1103 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 ZIM2Q9NZV7 527 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 ANGEL1Q9UNK9 670 aaKnown RBP5.81□□□□□ -1.48
BRCA1-204ENST00000412061 H7BY64 318 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 WNT9AO14904 365 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 GSTA4O15217 222 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 AKAP10O43572 662 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 USP2O75604 605 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-204ENST00000412061 SRGAP2CP0DJJ0 459 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 SPINK2P20155 84 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 CD97P48960 835 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 CORO7P57737 925 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 RTP1P59025 263 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 CHRNEQ04844 493 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 DHCR24Q15392 516 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 RALGPS1Q5JS13 557 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 ABHD17CQ6PCB6 329 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 SLC4A10Q6U841 1118 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 KSR2Q6VAB6 950 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 CEP128Q6ZU80 1094 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 SLCO6A1Q86UG4 719 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 WFDC3Q8IUB2 231 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 TTC8Q8TAM2 541 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 PANK1Q8TE04 598 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 FBXW5Q969U6 566 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 TMEM169Q96HH4 297 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 JMJD8Q96S16 334 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 ORAI3Q9BRQ5 295 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 CELF4Q9BZC1 486 aaKnown RBP5.8□□□□□ -1.48
BRCA1-204ENST00000412061 IPPKQ9H8X2 491 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 GNL3LQ9NVN8 582 aaKnown RBP5.8□□□□□ -1.48
BRCA1-204ENST00000412061 BTG4Q9NY30 223 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 CLDND1Q9NY35 253 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 EBF1Q9UH73 591 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 FBXL7Q9UJT9 491 aa5.8□□□□□ -1.48
BRCA1-204ENST00000412061 A0A1W2PQ27 194 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 A0A1W2PQ64 194 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 A0A1W2PQC6 194 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 A0A1W2PQD8 194 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 WTIPA6NIX2 430 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-204ENST00000412061 KIAA1324LA8MWY0 1029 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-204ENST00000412061 GLRX3O76003 335 aaKnown RBP5.79□□□□□ -1.48
BRCA1-204ENST00000412061 MED26O95402 600 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 CKMP06732 381 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 FUT4P22083 530 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 SSTR4P31391 388 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 NEK2P51955 445 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 ST5P78524 1137 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 HLTFQ14527 1009 aaKnown RBP eCLIP5.79□□□□□ -1.48
BRCA1-204ENST00000412061 SLC14A2Q15849 920 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 VPS72Q15906 364 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 LONRF3Q496Y0 759 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 HSF5Q4G112 596 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-204ENST00000412061 MCTP1Q6DN14 999 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 SLC23A3Q6PIS1 610 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 CEP68Q76N32 757 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 KIF18BQ86Y91 864 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 SPPL2CQ8IUH8 684 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 TEX2Q8IWB9 1127 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 OXR1Q8N573 874 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 IGSF22Q8N9C0 903 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 PDZD8Q8NEN9 1154 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 NLGN2Q8NFZ4 835 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 OR2W6PQ8NHA6 318 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 PNISRQ8TF01 805 aaKnown RBP5.79□□□□□ -1.48
BRCA1-204ENST00000412061 DPF3Q92784 378 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 TRMT2BQ96GJ1 504 aaKnown RBP5.79□□□□□ -1.48
BRCA1-204ENST00000412061 SMAD5Q99717 465 aaKnown RBP5.79□□□□□ -1.48
BRCA1-204ENST00000412061 ARPC5LQ9BPX5 153 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 MARCH2Q9P0N8 246 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 PPARGC1AQ9UBK2 798 aaKnown RBP5.79□□□□□ -1.48
BRCA1-204ENST00000412061 GULP1Q9UBP9 304 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 ADGRE2Q9UHX3 823 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 COQ6Q9Y2Z9 468 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 TAF6LQ9Y6J9 622 aa5.79□□□□□ -1.48
BRCA1-204ENST00000412061 CCDC66A2RUB6 948 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 M0R2C6 588 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 CBX4O00257 560 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 DNM2P50570 870 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 SCNN1BP51168 640 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 HK2P52789 917 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 STRN3Q13033 797 aa5.78□□□□□ -1.48
BRCA1-204ENST00000412061 ZRSR2Q15696 482 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms