RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 MYMKA6NI61 221 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 FAM196BA6NMK8 535 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 RAD21O60216 631 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 ITGBL1O95965 494 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-205ENST00000410093 GYPCP04921 128 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 ASNSP08243 561 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 CCT6AP40227 531 aaKnown RBP15.12■□□□□ 0.01
LIMS1-205ENST00000410093 EHHADHQ08426 723 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 IRF2BP1Q8IU81 584 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 CCDC65Q8IXS2 484 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 MICALL2Q8IY33 904 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 ZNF507Q8TCN5 953 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 ANKRD7Q92527 254 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 DEFB129Q9H1M3 183 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 VPS16Q9H269 839 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 VCPKMTQ9H867 229 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 FEM1BQ9UK73 627 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 PRR12Q9ULL5 1215 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 ZBTB12Q9Y330 459 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-205ENST00000410093 MRPL11Q9Y3B7 192 aaKnown RBP15.12■□□□□ 0.01
LIMS1-205ENST00000410093 POTEMA6NI47 508 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 TCP10L2B9ZVM9 353 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 USP17L15C9J2P7 530 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 USP17L13C9JLJ4 530 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 USP17L11C9JVI0 530 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 USP17L18D6R9N7 530 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 USP17L22D6RA61 530 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 USP17L17D6RBQ6 530 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 USP17L19D6RCP7 530 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 USP17L20D6RJB6 530 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 GNA14O95837 355 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 CASP14P31944 242 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 TUBB4BP68371 445 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 USP17L24Q0WX57 530 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 STK4Q13043 487 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 MCM6Q14566 821 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 FKBP15Q5T1M5 1219 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 USP17L6PQ6QN14 398 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 PDCL2Q8N4E4 241 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 OR8K1Q8NGG5 319 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 LRRC15Q8TF66 581 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 NUP88Q99567 741 aaPredicted RBP15.12■□□□□ 0.01
LIMS1-205ENST00000410093 DUSP9Q99956 384 aaKnown RBP15.12■□□□□ 0.01
LIMS1-205ENST00000410093 TUBGCP2Q9BSJ2 902 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 ABHD10Q9NUJ1 306 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 TAB2Q9NYJ8 693 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 MYO1AQ9UBC5 1043 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 CAPN11Q9UMQ6 739 aa15.12■□□□□ 0.01
LIMS1-205ENST00000410093 A0A1W2PQJ5 194 aa15.11■□□□□ 0.01
LIMS1-205ENST00000410093 TRIM65Q6PJ69 517 aa15.11■□□□□ 0.01
LIMS1-205ENST00000410093 SYT10Q6XYQ8 523 aa15.11■□□□□ 0.01
LIMS1-205ENST00000410093 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
LIMS1-205ENST00000410093 CCDC84Q86UT8 332 aaPredicted RBP15.11■□□□□ 0.01
LIMS1-205ENST00000410093 ETNPPLQ8TBG4 499 aa15.11■□□□□ 0.01
LIMS1-205ENST00000410093 ZC3H15Q8WU90 426 aaKnown RBP15.11■□□□□ 0.01
LIMS1-205ENST00000410093 DDX12PQ92771 950 aa15.11■□□□□ 0.01
LIMS1-205ENST00000410093 ERGIC2Q96RQ1 377 aa15.11■□□□□ 0.01
LIMS1-205ENST00000410093 RANBP17Q9H2T7 1088 aaKnown RBP15.11■□□□□ 0.01
LIMS1-205ENST00000410093 MAPK8IP1Q9UQF2 711 aa15.11■□□□□ 0.01
LIMS1-205ENST00000410093 LUC7L2Q9Y383 392 aaKnown RBP15.11■□□□□ 0.01
LIMS1-205ENST00000410093 RPA1P27694 616 aa15.1■□□□□ 0.01
LIMS1-205ENST00000410093 CAP2P40123 477 aa15.1■□□□□ 0.01
LIMS1-205ENST00000410093 ANKRD40Q6AI12 368 aa15.1■□□□□ 0.01
LIMS1-205ENST00000410093 MYOCDQ8IZQ8 938 aa15.1■□□□□ 0.01
LIMS1-205ENST00000410093 KIAA0895Q8NCT3 520 aa15.1■□□□□ 0.01
LIMS1-205ENST00000410093 ZNF397Q8NF99 534 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-205ENST00000410093 LPAR1Q92633 364 aa15.1■□□□□ 0.01
LIMS1-205ENST00000410093 POLR3CQ9BUI4 534 aaPredicted RBP15.1■□□□□ 0.01
LIMS1-205ENST00000410093 EDEM3Q9BZQ6 932 aa15.1■□□□□ 0.01
LIMS1-205ENST00000410093 MAP3K20Q9NYL2 800 aaKnown RBP15.1■□□□□ 0.01
LIMS1-205ENST00000410093 CGNQ9P2M7 1197 aaKnown RBP15.1■□□□□ 0.01
LIMS1-205ENST00000410093 DNAI1Q9UI46 699 aa15.1■□□□□ 0.01
LIMS1-205ENST00000410093 ABT1Q9ULW3 272 aaKnown RBP15.1■□□□□ 0.01
LIMS1-205ENST00000410093 ATAD5Q96QE3 1844 aa15.1■□□□□ 0.01
LIMS1-205ENST00000410093 A0A1W2PRG0 241 aa15.09■□□□□ 0.01
LIMS1-205ENST00000410093 TRIM49BA6NDI0 452 aa15.09■□□□□ 0.01
LIMS1-205ENST00000410093 GCOM1H8Y6P7 765 aaPredicted RBP15.09■□□□□ 0.01
LIMS1-205ENST00000410093 POLR2MP0CAP2 368 aa15.09■□□□□ 0.01
LIMS1-205ENST00000410093 KRT9P35527 623 aa15.09■□□□□ 0.01
LIMS1-205ENST00000410093 MTIF2P46199 727 aaKnown RBP15.09■□□□□ 0.01
LIMS1-205ENST00000410093 PMS1P54277 932 aaKnown RBP15.09■□□□□ 0.01
LIMS1-205ENST00000410093 CDK17Q00537 523 aa15.09■□□□□ 0.01
LIMS1-205ENST00000410093 ZNF662Q6ZS27 426 aa15.09■□□□□ 0.01
LIMS1-205ENST00000410093 HOOK2Q96ED9 719 aa15.09■□□□□ 0.01
LIMS1-205ENST00000410093 CNOT6LQ96LI5 555 aaKnown RBP15.09■□□□□ 0.01
LIMS1-205ENST00000410093 CEP63Q96MT8 703 aa15.09■□□□□ 0.01
LIMS1-205ENST00000410093 DNAJC7Q99615 494 aa15.09■□□□□ 0.01
LIMS1-205ENST00000410093 ZNHIT6Q9NWK9 470 aaKnown RBP15.09■□□□□ 0.01
LIMS1-205ENST00000410093 DNM3Q9UQ16 869 aa15.09■□□□□ 0.01
LIMS1-205ENST00000410093 ADGRG1Q9Y653 693 aa15.09■□□□□ 0.01
LIMS1-205ENST00000410093 FRMD3A2A2Y4 597 aa15.08■□□□□ 0.01
LIMS1-205ENST00000410093 KIF5CO60282 957 aa15.08■□□□□ 0.01
LIMS1-205ENST00000410093 PLA2G4BP0C869 781 aa15.08■□□□□ 0.01
LIMS1-205ENST00000410093 FDX1P10109 184 aa15.08■□□□□ 0.01
LIMS1-205ENST00000410093 CASQ1P31415 396 aa15.08■□□□□ 0.01
LIMS1-205ENST00000410093 FXR1P51114 621 aaKnown RBP eCLIP15.08■□□□□ 0.01
LIMS1-205ENST00000410093 ZNF280AP59817 542 aaPredicted RBP15.08■□□□□ 0.01
LIMS1-205ENST00000410093 FKBP3Q00688 224 aaKnown RBP15.08■□□□□ 0.01
LIMS1-205ENST00000410093 SETQ01105 290 aaPredicted RBP15.08■□□□□ 0.01
LIMS1-205ENST00000410093 TBC1D8BQ0IIM8 1120 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms