RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SHTN1A0MZ66 631 aa22.42■■□□□ 1.18
USP39-204ENST00000409766 B4DLN1 442 aa22.42■■□□□ 1.18
USP39-204ENST00000409766 PLA2G4BP0C869 781 aa22.42■■□□□ 1.18
USP39-204ENST00000409766 TMTC1Q8IUR5 882 aa22.42■■□□□ 1.18
USP39-204ENST00000409766 PES1O00541 588 aaKnown RBP22.41■■□□□ 1.18
USP39-204ENST00000409766 KRT9P35527 623 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 COASYQ13057 564 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 MIIPQ5JXC2 388 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 HAUS3Q68CZ6 603 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 JDP2Q8WYK2 163 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 KIFC2Q96AC6 838 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 GLIS2Q9BZE0 524 aaPredicted RBP22.41■■□□□ 1.18
USP39-204ENST00000409766 PDCL3Q9H2J4 239 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 MRPL44Q9H9J2 332 aaKnown RBP22.41■■□□□ 1.18
USP39-204ENST00000409766 BMP2KQ9NSY1 1161 aaPredicted RBP22.41■■□□□ 1.18
USP39-204ENST00000409766 TTC26A0AVF1 554 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 MSH4O15457 936 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 ASNSP08243 561 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 POLD1P28340 1107 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 ERVK-24P63145 666 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 LRRC63Q05C16 580 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 ZYXQ15942 572 aaKnown RBP22.41■■□□□ 1.18
USP39-204ENST00000409766 FOXR2Q6PJQ5 311 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 GLIS3Q8NEA6 775 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 PANK4Q9NVE7 773 aa22.41■■□□□ 1.18
USP39-204ENST00000409766 ATAD5Q96QE3 1844 aa22.4■■□□□ 1.18
USP39-204ENST00000409766 SLU7O95391 586 aaKnown RBP22.4■■□□□ 1.18
USP39-204ENST00000409766 SSBP05455 408 aaKnown RBP eCLIP22.4■■□□□ 1.18
USP39-204ENST00000409766 MTIF2P46199 727 aaKnown RBP22.4■■□□□ 1.18
USP39-204ENST00000409766 CCDC174Q6PII3 467 aa22.4■■□□□ 1.18
USP39-204ENST00000409766 FAM160B2Q86V87 743 aa22.4■■□□□ 1.18
USP39-204ENST00000409766 CATSPER3Q86XQ3 398 aa22.4■■□□□ 1.18
USP39-204ENST00000409766 CYP2W1Q8TAV3 490 aa22.4■■□□□ 1.18
USP39-204ENST00000409766 TBC1D5Q92609 795 aa22.4■■□□□ 1.18
USP39-204ENST00000409766 RPA1P27694 616 aa22.4■■□□□ 1.18
USP39-204ENST00000409766 NAA30Q147X3 362 aaPredicted RBP22.4■■□□□ 1.18
USP39-204ENST00000409766 R3HDM1Q15032 1099 aaKnown RBP22.4■■□□□ 1.18
USP39-204ENST00000409766 CYP26C1Q6V0L0 522 aa22.4■■□□□ 1.18
USP39-204ENST00000409766 CAPN11Q9UMQ6 739 aa22.4■■□□□ 1.18
USP39-204ENST00000409766 IGLV3-22A0A075B6J6 115 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 POTEFA5A3E0 1075 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 PHF20L1A8MW92 1017 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 NFKBIEO00221 500 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 NKRFO15226 690 aaKnown RBP eCLIP22.39■■□□□ 1.17
USP39-204ENST00000409766 CFBP00751 764 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 POTEIP0CG38 1075 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 SPATA31C1P0DKV0 1188 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 CYP11B2P19099 503 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 SLC12A3P55017 1021 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 ZNF280AP59817 542 aaPredicted RBP22.39■■□□□ 1.17
USP39-204ENST00000409766 TBC1D8BQ0IIM8 1120 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 RASA3Q14644 834 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 TNIP1Q15025 636 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 LRRC41Q15345 812 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 NCAPH2Q6IBW4 605 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 POTEGQ6S5H5 508 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 POTEEQ6S8J3 1075 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 ERMNQ8TAM6 284 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 ERO1AQ96HE7 468 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 NOC4LQ9BVI4 516 aaKnown RBP22.39■■□□□ 1.17
USP39-204ENST00000409766 FEM1BQ9UK73 627 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 VAV3Q9UKW4 847 aa22.39■■□□□ 1.17
USP39-204ENST00000409766 FAM26FQ5R3K3 315 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 GPBP1Q86WP2 473 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 MYOCDQ8IZQ8 938 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 DNAJC7Q99615 494 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 TTYH3Q9C0H2 523 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 LUC7L2Q9Y383 392 aaKnown RBP22.38■■□□□ 1.17
USP39-204ENST00000409766 PCDHA2Q9Y5H9 948 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 STK24Q9Y6E0 443 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 GCOM1H8Y6P7 765 aaPredicted RBP22.38■■□□□ 1.17
USP39-204ENST00000409766 FGFR1OPO95684 399 aaKnown RBP22.38■■□□□ 1.17
USP39-204ENST00000409766 POLR2MP0CAP2 368 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 ZNF76P36508 570 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 GNG11P61952 73 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 ARSHQ5FYA8 562 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 CCDC84Q86UT8 332 aaPredicted RBP22.38■■□□□ 1.17
USP39-204ENST00000409766 CCDC65Q8IXS2 484 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 OR8K1Q8NGG5 319 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 WDR24Q96S15 920 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 FBXO28Q9NVF7 368 aa22.38■■□□□ 1.17
USP39-204ENST00000409766 SCAF8Q9UPN6 1271 aaKnown RBP22.38■■□□□ 1.17
USP39-204ENST00000409766 ABCB11O95342 1321 aa22.37■■□□□ 1.17
USP39-204ENST00000409766 RASSF10A6NK89 507 aa22.37■■□□□ 1.17
USP39-204ENST00000409766 EGFRP00533 1210 aa22.37■■□□□ 1.17
USP39-204ENST00000409766 ZCWPW2Q504Y3 356 aa22.37■■□□□ 1.17
USP39-204ENST00000409766 LRRC55Q6ZSA7 311 aa22.37■■□□□ 1.17
USP39-204ENST00000409766 RETREG2Q8NC44 543 aa22.37■■□□□ 1.17
USP39-204ENST00000409766 TEPSINQ96N21 525 aa22.37■■□□□ 1.17
USP39-204ENST00000409766 ERGIC2Q96RQ1 377 aa22.37■■□□□ 1.17
USP39-204ENST00000409766 NUP58Q9BVL2 599 aa22.37■■□□□ 1.17
USP39-204ENST00000409766 MRPL11Q9Y3B7 192 aaKnown RBP22.37■■□□□ 1.17
USP39-204ENST00000409766 PITPNM2Q9BZ72 1349 aa22.37■■□□□ 1.17
USP39-204ENST00000409766 NPHP3-ACAD11A0A0J9YXS1 232 aa22.36■■□□□ 1.17
USP39-204ENST00000409766 FRMD3A2A2Y4 597 aa22.36■■□□□ 1.17
USP39-204ENST00000409766 SGIP1Q9BQI5 828 aa22.36■■□□□ 1.17
USP39-204ENST00000409766 PSMC6P62333 389 aa22.36■■□□□ 1.17
USP39-204ENST00000409766 KIF4BQ2VIQ3 1234 aa22.36■■□□□ 1.17
USP39-204ENST00000409766 FGFBP2Q9BYJ0 223 aa22.36■■□□□ 1.17
USP39-204ENST00000409766 A0A0U1RQJ8 604 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms