RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 TYW1BQ6NUM6 668 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 ERO1BQ86YB8 467 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 THNSL1Q8IYQ7 743 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 ATP6V0A1Q93050 837 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 SPATA33Q96N06 139 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 PHF20Q9BVI0 1012 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 PALM3A6NDB9 673 aaPredicted RBP12.61□□□□□ -0.39
SNX13-202ENST00000409604 PPP6R2O75170 966 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 CNTN2Q02246 1040 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 LLGL1Q15334 1064 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 NLRP7Q8WX94 980 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 MAP7D2Q96T17 732 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 NRBP2Q9NSY0 501 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 ABCC6O95255 1503 aa12.61□□□□□ -0.39
SNX13-202ENST00000409604 GTPBP6O43824 516 aaPredicted RBP12.6□□□□□ -0.39
SNX13-202ENST00000409604 SLC37A4O43826 429 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 YY1P25490 414 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 IFRD2Q12894 506 aaPredicted RBP12.6□□□□□ -0.39
SNX13-202ENST00000409604 TRPC3Q13507 836 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 TAF3Q5VWG9 929 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 KSR1Q8IVT5 923 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
SNX13-202ENST00000409604 WDR11Q9BZH6 1224 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 FAM217BQ9NTX9 383 aaPredicted RBP12.6□□□□□ -0.39
SNX13-202ENST00000409604 DNAI1Q9UI46 699 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 DMP1Q13316 513 aaPredicted RBP12.6□□□□□ -0.39
SNX13-202ENST00000409604 MORC3Q14149 939 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 LPAR1Q92633 364 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 IDI2Q9BXS1 227 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 MAN1B1Q9UKM7 699 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 TMX2Q9Y320 296 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 COL4A3BPQ9Y5P4 624 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 KIAA0100Q14667 2235 aaKnown RBP12.6□□□□□ -0.39
SNX13-202ENST00000409604 KDM3AQ9Y4C1 1321 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 M0QZ92 97 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 FOXP2O15409 715 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 GCFC2P16383 781 aaKnown RBP12.6□□□□□ -0.39
SNX13-202ENST00000409604 NR2F2P24468 414 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 SH3BP5LQ7L8J4 393 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 FAM163AQ96GL9 167 aaPredicted RBP12.6□□□□□ -0.39
SNX13-202ENST00000409604 TACC3Q9Y6A5 838 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 SALL1Q9NSC2 1324 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 FAM193AP78312 1265 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 KMT5BQ4FZB7 885 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.6□□□□□ -0.39
SNX13-202ENST00000409604 RAET1EQ8TD07 263 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 TAF4BQ92750 862 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 CTAGE1Q96RT6 745 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 LXNQ9BS40 222 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 DESI2Q9BSY9 194 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 CENPHQ9H3R5 247 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 RIC8AQ9NPQ8 531 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 KMT5AQ9NQR1 393 aa12.6□□□□□ -0.39
SNX13-202ENST00000409604 SLC16A4O15374 487 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 KIF5CO60282 957 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 DKC1O60832 514 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNX13-202ENST00000409604 CSDE1O75534 798 aaKnown RBP12.59□□□□□ -0.39
SNX13-202ENST00000409604 ERLIN2O94905 339 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 CTSHP09668 335 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 YBX3P16989 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
SNX13-202ENST00000409604 NTRK3Q16288 839 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 RRAGAQ7L523 313 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 NACC1Q96RE7 527 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 GAKO14976 1311 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 A0A1W2PQ27 194 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 A0A1W2PQ64 194 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 A0A1W2PQD8 194 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 C19orf81C9J6K1 198 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 CAVIN2O95810 425 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 FAM83AQ86UY5 434 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 PLEKHA4Q9H4M7 779 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 WDR19Q8NEZ3 1342 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 KCNJ18B7U540 433 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 PTPRAP18433 802 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 KCNJ12Q14500 433 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 TEX35Q5T0J7 233 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 MMS19Q96T76 1030 aa12.59□□□□□ -0.39
SNX13-202ENST00000409604 TMEM150BA6NC51 233 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 MIS18BP1Q6P0N0 1132 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 PHLDB2Q86SQ0 1253 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 SFR1Q86XK3 245 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 FBXO16Q8IX29 292 aaPredicted RBP12.58□□□□□ -0.4
SNX13-202ENST00000409604 PPM1KQ8N3J5 372 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 GBP3Q9H0R5 595 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 AHDC1Q5TGY3 1603 aaPredicted RBP12.58□□□□□ -0.4
SNX13-202ENST00000409604 PHRF1Q9P1Y6 1649 aaKnown RBP12.58□□□□□ -0.4
SNX13-202ENST00000409604 PDHXO00330 501 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 ARP10275 920 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 PKN1Q16512 942 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 TMEM143Q96AN5 459 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 CAPZA3Q96KX2 299 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 ST7Q9NRC1 585 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 ARMCX3Q9UH62 379 aaPredicted RBP12.58□□□□□ -0.4
SNX13-202ENST00000409604 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.58□□□□□ -0.4
SNX13-202ENST00000409604 STK36Q9NRP7 1315 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 LRRN2O75325 713 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 FAM160B1Q5W0V3 765 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 USP37Q86T82 979 aa12.58□□□□□ -0.4
SNX13-202ENST00000409604 RHPN2Q8IUC4 686 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms