RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 SLC38A10Q9HBR0 1119 aa13.21□□□□□ -0.29
SMS-202ENST00000404933 BMP2KQ9NSY1 1161 aaPredicted RBP13.21□□□□□ -0.29
SMS-202ENST00000404933 EMILIN3Q9NT22 766 aa13.21□□□□□ -0.29
SMS-202ENST00000404933 ADD3Q9UEY8 706 aaKnown RBP13.21□□□□□ -0.29
SMS-202ENST00000404933 LIMA1Q9UHB6 759 aaKnown RBP13.21□□□□□ -0.29
SMS-202ENST00000404933 KIAA1024Q9UPX6 916 aa13.21□□□□□ -0.29
SMS-202ENST00000404933 ZNF536O15090 1300 aa13.21□□□□□ -0.29
SMS-202ENST00000404933 IGLV3-22A0A075B6J6 115 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 LRRC10BA6NIK2 292 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 FLOT1O75955 427 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 PTPRAP18433 802 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 HSD17B4P51659 736 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 BACE1P56817 501 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 CBX1P83916 185 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 SPP2Q13103 211 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 PSMD2Q13200 908 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 SUPT20HL1Q3ZLR7 823 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 NCAPH2Q6IBW4 605 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 SAMD3Q8N6K7 520 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 DDX12PQ92771 950 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 RPAP3Q9H6T3 665 aaPredicted RBP13.2□□□□□ -0.3
SMS-202ENST00000404933 PPP1R9AQ9ULJ8 1098 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 CTDP1Q9Y5B0 961 aaPredicted RBP13.2□□□□□ -0.3
SMS-202ENST00000404933 PITPNM2Q9BZ72 1349 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 RBBP6Q7Z6E9 1792 aaKnown RBP13.2□□□□□ -0.3
SMS-202ENST00000404933 PARP14Q460N5 1801 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 PHIPQ8WWQ0 1821 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 KCNJ18B7U540 433 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 COBLO75128 1261 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 ZBED4O75132 1171 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 CCNE1P24864 410 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 RPA1P27694 616 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 STAT3P40763 770 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 KCNJ6P48051 423 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 HIRAP54198 1017 aaPredicted RBP13.2□□□□□ -0.3
SMS-202ENST00000404933 NCBP1Q09161 790 aaKnown RBP13.2□□□□□ -0.3
SMS-202ENST00000404933 STK4Q13043 487 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 TBX2Q13207 712 aaPredicted RBP13.2□□□□□ -0.3
SMS-202ENST00000404933 KCNJ12Q14500 433 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 TCP11X2Q5H9J9 407 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 PRAMEF18Q5VWM3 479 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 DYMQ7RTS9 669 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 P2RX5Q93086 422 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 ZKSCAN4Q969J2 545 aaPredicted RBP13.2□□□□□ -0.3
SMS-202ENST00000404933 TRIM47Q96LD4 638 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 UIMC1Q96RL1 719 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 THAP9Q9H5L6 903 aa13.2□□□□□ -0.3
SMS-202ENST00000404933 MAP3K20Q9NYL2 800 aaKnown RBP13.2□□□□□ -0.3
SMS-202ENST00000404933 POLR2AP24928 1970 aaKnown RBP13.2□□□□□ -0.3
SMS-202ENST00000404933 POTEB3A0JP26 581 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 POTECB2RU33 542 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 C19orf81C9J6K1 198 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 MED24O75448 989 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 PLA2G4BP0C869 781 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 FCER1AP12319 257 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 SETQ01105 290 aaPredicted RBP13.19□□□□□ -0.3
SMS-202ENST00000404933 GHRHRQ02643 423 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 KRT31Q15323 416 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 CEP55Q53EZ4 464 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 TTI2Q6NXR4 508 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 POTEBQ6S5H4 581 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 KCTD17Q8N5Z5 321 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 CYP2W1Q8TAV3 490 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 KLRG1Q96E93 195 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 VAV3Q9UKW4 847 aa13.19□□□□□ -0.3
SMS-202ENST00000404933 TRIM49BA6NDI0 452 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 E9PMD0 336 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 SSBP05455 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMS-202ENST00000404933 IDEP14735 1019 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 EEF1GP26641 437 aaKnown RBP13.18□□□□□ -0.3
SMS-202ENST00000404933 DGKZQ13574 1117 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 NOL9Q5SY16 702 aaKnown RBP13.18□□□□□ -0.3
SMS-202ENST00000404933 CATSPER3Q86XQ3 398 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 CPXCR1Q8N123 301 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 KIAA0895Q8NCT3 520 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 CLEC4DQ8WXI8 215 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 TSC1Q92574 1164 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 DNAJC19Q96DA6 116 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 C12orf42Q96LP6 360 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 POLR3CQ9BUI4 534 aaPredicted RBP13.18□□□□□ -0.3
SMS-202ENST00000404933 RAVER2Q9HCJ3 691 aaKnown RBP13.18□□□□□ -0.3
SMS-202ENST00000404933 ADARB2Q9NS39 739 aaKnown RBP13.18□□□□□ -0.3
SMS-202ENST00000404933 MAGEC2Q9UBF1 373 aaPredicted RBP13.18□□□□□ -0.3
SMS-202ENST00000404933 DDX41Q9UJV9 622 aaKnown RBP13.18□□□□□ -0.3
SMS-202ENST00000404933 N4BP3O15049 544 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 TEX33O43247 280 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 ALAS1P13196 640 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 COPB1P53618 953 aaKnown RBP13.18□□□□□ -0.3
SMS-202ENST00000404933 PMS1P54277 932 aaKnown RBP13.18□□□□□ -0.3
SMS-202ENST00000404933 EHHADHQ08426 723 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 CEP135Q66GS9 1140 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 KRT26Q7Z3Y9 468 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 FAM114A1Q8IWE2 563 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 CCDC65Q8IXS2 484 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 GUF1Q8N442 669 aaKnown RBP13.18□□□□□ -0.3
SMS-202ENST00000404933 CSGALNACT2Q8N6G5 542 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 SLC5A5Q92911 643 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 SRRTQ9BXP5 876 aaKnown RBP13.18□□□□□ -0.3
SMS-202ENST00000404933 SLC39A2Q9NP94 309 aa13.18□□□□□ -0.3
SMS-202ENST00000404933 RNF181Q9P0P0 153 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms