RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 CCDC85CA6NKD9 419 aa23.66■■□□□ 1.38
TPM1-208ENST00000404484 TECP42680 631 aa23.66■■□□□ 1.38
TPM1-208ENST00000404484 POSTNQ15063 836 aa23.66■■□□□ 1.38
TPM1-208ENST00000404484 KCNMB3Q9NPA1 279 aa23.66■■□□□ 1.38
TPM1-208ENST00000404484 DISC1Q9NRI5 854 aa23.66■■□□□ 1.38
TPM1-208ENST00000404484 HOMER2Q9NSB8 354 aa23.66■■□□□ 1.38
TPM1-208ENST00000404484 SRRDQ9UH36 339 aa23.66■■□□□ 1.38
TPM1-208ENST00000404484 COL11A1P12107 1806 aaPredicted RBP23.66■■□□□ 1.38
TPM1-208ENST00000404484 TMEM132BQ14DG7 1078 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 CABP7Q86V35 215 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 GPRC5AQ8NFJ5 357 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 FAM20AQ96MK3 541 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 PAGR1Q9BTK6 254 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 CUEDC2Q9H467 287 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 TTC12Q9H892 705 aaPredicted RBP23.65■■□□□ 1.38
TPM1-208ENST00000404484 LRWD1Q9UFC0 647 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 PTCH2Q9Y6C5 1203 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 A0A087X0B3 334 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 SLC26A4O43511 780 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 HOXD10P28358 340 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 STAT6P42226 847 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 PRR16Q569H4 304 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 MUM1L1Q5H9M0 696 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 LBX2Q6XYB7 198 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 GTF3C2Q8WUA4 911 aaPredicted RBP23.65■■□□□ 1.38
TPM1-208ENST00000404484 HAS1Q92839 578 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 CALML4Q96GE6 196 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 MAGEF1Q9HAY2 307 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 TUBE1Q9UJT0 475 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 PCDHA12Q9UN75 941 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 DOCK3Q8IZD9 2030 aa23.65■■□□□ 1.38
TPM1-208ENST00000404484 RPTORQ8N122 1335 aa23.64■■□□□ 1.38
TPM1-208ENST00000404484 CNMDO75829 334 aa23.64■■□□□ 1.37
TPM1-208ENST00000404484 SMC2O95347 1197 aa23.64■■□□□ 1.37
TPM1-208ENST00000404484 STAT3P40763 770 aa23.64■■□□□ 1.37
TPM1-208ENST00000404484 ERVK-9P63128 1117 aa23.64■■□□□ 1.37
TPM1-208ENST00000404484 ERVK-24P63145 666 aa23.64■■□□□ 1.37
TPM1-208ENST00000404484 SETQ01105 290 aaPredicted RBP23.64■■□□□ 1.37
TPM1-208ENST00000404484 E2F4Q16254 413 aa23.64■■□□□ 1.37
TPM1-208ENST00000404484 UVSSAQ2YD98 709 aa23.64■■□□□ 1.37
TPM1-208ENST00000404484 RRAGBQ5VZM2 374 aa23.64■■□□□ 1.37
TPM1-208ENST00000404484 RNF207Q6ZRF8 634 aa23.64■■□□□ 1.37
TPM1-208ENST00000404484 FAM200AQ8TCP9 573 aa23.64■■□□□ 1.37
TPM1-208ENST00000404484 ANP32BQ92688 251 aaKnown RBP23.64■■□□□ 1.37
TPM1-208ENST00000404484 ACAD9Q9H845 621 aa23.64■■□□□ 1.37
TPM1-208ENST00000404484 STK24Q9Y6E0 443 aa23.64■■□□□ 1.37
TPM1-208ENST00000404484 A0A0G2JMZ2 1700 aa23.63■■□□□ 1.37
TPM1-208ENST00000404484 TNPO2O14787 897 aaKnown RBP23.63■■□□□ 1.37
TPM1-208ENST00000404484 XRCC6P12956 609 aaKnown RBP eCLIP23.63■■□□□ 1.37
TPM1-208ENST00000404484 MDM2Q00987 491 aaPredicted RBP23.63■■□□□ 1.37
TPM1-208ENST00000404484 PNOCQ13519 176 aa23.63■■□□□ 1.37
TPM1-208ENST00000404484 ANO6Q4KMQ2 910 aa23.63■■□□□ 1.37
TPM1-208ENST00000404484 RNF214Q8ND24 703 aa23.63■■□□□ 1.37
TPM1-208ENST00000404484 SYTL5Q8TDW5 730 aaPredicted RBP23.63■■□□□ 1.37
TPM1-208ENST00000404484 NAT10Q9H0A0 1025 aaKnown RBP23.63■■□□□ 1.37
TPM1-208ENST00000404484 BTBD7Q9P203 1132 aa23.63■■□□□ 1.37
TPM1-208ENST00000404484 GABRQQ9UN88 632 aa23.63■■□□□ 1.37
TPM1-208ENST00000404484 FAM86B1E9PN63 330 aa23.62■■□□□ 1.37
TPM1-208ENST00000404484 FAM86B2P0C5J1 330 aa23.62■■□□□ 1.37
TPM1-208ENST00000404484 PRMT2P55345 433 aa23.62■■□□□ 1.37
TPM1-208ENST00000404484 RPS6P62753 249 aaKnown RBP23.62■■□□□ 1.37
TPM1-208ENST00000404484 PRKCZQ05513 592 aa23.62■■□□□ 1.37
TPM1-208ENST00000404484 KARSQ15046 597 aaKnown RBP23.62■■□□□ 1.37
TPM1-208ENST00000404484 KRT79Q5XKE5 535 aa23.62■■□□□ 1.37
TPM1-208ENST00000404484 SH3RF1Q7Z6J0 888 aa23.62■■□□□ 1.37
TPM1-208ENST00000404484 CHST13Q8NET6 341 aa23.62■■□□□ 1.37
TPM1-208ENST00000404484 ETNPPLQ8TBG4 499 aa23.62■■□□□ 1.37
TPM1-208ENST00000404484 SMARCE1Q969G3 411 aa23.62■■□□□ 1.37
TPM1-208ENST00000404484 FRMPD4Q14CM0 1322 aa23.62■■□□□ 1.37
TPM1-208ENST00000404484 PP2D1A8MPX8 630 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 NLRP12P59046 1061 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 PLS1Q14651 629 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 CEP55Q53EZ4 464 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 PDXDC2PQ6P474 469 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 NSMFQ6X4W1 530 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 LENG9Q96B70 501 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 PAGE5Q96GU1 130 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 FBXO40Q9UH90 709 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 CDC25AP30304 524 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 COPB2P35606 906 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 NIPA1Q7RTP0 329 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 TRIML1Q8N9V2 468 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 CDK5RAP3Q96JB5 506 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 PORCNQ9H237 461 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 RIPK3Q9Y572 518 aa23.61■■□□□ 1.37
TPM1-208ENST00000404484 IGLV3-22A0A075B6J6 115 aa23.6■■□□□ 1.37
TPM1-208ENST00000404484 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.6■■□□□ 1.37
TPM1-208ENST00000404484 MYL1P05976 194 aa23.6■■□□□ 1.37
TPM1-208ENST00000404484 FLT3LGP49771 235 aa23.6■■□□□ 1.37
TPM1-208ENST00000404484 NT5DC1Q5TFE4 455 aa23.6■■□□□ 1.37
TPM1-208ENST00000404484 PCNX4Q63HM2 1172 aa23.6■■□□□ 1.37
TPM1-208ENST00000404484 XRRA1Q6P2D8 792 aa23.6■■□□□ 1.37
TPM1-208ENST00000404484 ERCC4Q92889 916 aaPredicted RBP23.6■■□□□ 1.37
TPM1-208ENST00000404484 COL20A1Q9P218 1284 aa23.6■■□□□ 1.37
TPM1-208ENST00000404484 PCDHA5Q9Y5H7 936 aa23.6■■□□□ 1.37
TPM1-208ENST00000404484 KDM3AQ9Y4C1 1321 aa23.6■■□□□ 1.37
TPM1-208ENST00000404484 MGAMO43451 1857 aa23.59■■□□□ 1.37
TPM1-208ENST00000404484 BRCA2P51587 3418 aa23.59■■□□□ 1.37
TPM1-208ENST00000404484 ZNF165P49910 485 aa23.59■■□□□ 1.37
TPM1-208ENST00000404484 SLC30A10Q6XR72 485 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms