RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 CAVIN4Q5BKX8 364 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 TAF4BQ92750 862 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 CCDC113Q9H0I3 377 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 BAIAP2L1Q9UHR4 511 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 ODF2LQ9ULJ1 636 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 TSPY3P0CV98 308 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 TSPY8P0CW00 308 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 MAGOHP61326 146 aaKnown RBP10.53□□□□□ -0.72
SMC1B-202ENST00000404354 FAM83BQ5T0W9 1011 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 SPTY2D1Q68D10 685 aaPredicted RBP10.53□□□□□ -0.72
SMC1B-202ENST00000404354 SV2BQ7L1I2 683 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 BAP1Q92560 729 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 MAGOHBQ96A72 148 aaKnown RBP10.53□□□□□ -0.72
SMC1B-202ENST00000404354 CALML4Q96GE6 196 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 OSBPL7Q9BZF2 842 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 DDX20Q9UHI6 824 aaKnown RBP10.53□□□□□ -0.72
SMC1B-202ENST00000404354 FBXL5Q9UKA1 691 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 LAMB4A4D0S4 1761 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 EPS15P42566 896 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 KLHL30Q0D2K2 578 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 KRT71Q3SY84 523 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 SLC9C1Q4G0N8 1177 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 SFMBT2Q5VUG0 894 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 KDM7AQ6ZMT4 941 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 MICALCLQ6ZW33 695 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 KLRF2D3W0D1 207 aa10.52□□□□□ -0.72
SMC1B-202ENST00000404354 BUB1BO60566 1050 aaPredicted RBP10.52□□□□□ -0.72
SMC1B-202ENST00000404354 TDP2O95551 362 aa10.52□□□□□ -0.72
SMC1B-202ENST00000404354 NF2P35240 595 aa10.52□□□□□ -0.72
SMC1B-202ENST00000404354 ITGB3BPQ13352 177 aaPredicted RBP10.52□□□□□ -0.72
SMC1B-202ENST00000404354 MAN2A1Q16706 1144 aa10.52□□□□□ -0.72
SMC1B-202ENST00000404354 CNNM4Q6P4Q7 775 aa10.52□□□□□ -0.72
SMC1B-202ENST00000404354 PDXDC1Q6P996 788 aa10.52□□□□□ -0.72
SMC1B-202ENST00000404354 TMED8Q6PL24 325 aaPredicted RBP10.52□□□□□ -0.72
SMC1B-202ENST00000404354 PNMA8AQ86V59 439 aaPredicted RBP10.52□□□□□ -0.72
SMC1B-202ENST00000404354 CAVIN3Q969G5 261 aa10.52□□□□□ -0.72
SMC1B-202ENST00000404354 COA7Q96BR5 231 aa10.52□□□□□ -0.72
SMC1B-202ENST00000404354 GPR101Q96P66 508 aaPredicted RBP10.52□□□□□ -0.72
SMC1B-202ENST00000404354 MMTAG2Q9BU76 263 aaKnown RBP10.52□□□□□ -0.72
SMC1B-202ENST00000404354 IFNAR2P48551 515 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 IFFO1Q0D2I5 559 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 HGSNATQ68CP4 663 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 TCP11Q8WWU5 503 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 CELF1Q92879 486 aaKnown RBP10.52□□□□□ -0.73
SMC1B-202ENST00000404354 FAM84BQ96KN1 310 aaPredicted RBP10.52□□□□□ -0.73
SMC1B-202ENST00000404354 NLRP3Q96P20 1036 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 ATP8A1Q9Y2Q0 1164 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 FRMPD2Q68DX3 1309 aaPredicted RBP10.52□□□□□ -0.73
SMC1B-202ENST00000404354 GSCP56915 257 aaPredicted RBP10.52□□□□□ -0.73
SMC1B-202ENST00000404354 TCERG1LQ5VWI1 586 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 TXNRD3Q86VQ6 643 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 CLEC10AQ8IUN9 316 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 MAPKAPK5Q8IW41 473 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 DDX12PQ92771 950 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 SELENOSQ9BQE4 189 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 CRNKL1Q9BZJ0 848 aaKnown RBP10.52□□□□□ -0.73
SMC1B-202ENST00000404354 CCSER1Q9C0I3 900 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 GDF3Q9NR23 364 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 BCS1LQ9Y276 419 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 FLT1P17948 1338 aa10.52□□□□□ -0.73
SMC1B-202ENST00000404354 NID2Q14112 1375 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 ZNF142P52746 1687 aaPredicted RBP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 GMNCA6NCL1 334 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 FAM107AO95990 144 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 CLTAP09496 248 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 EPB41P11171 864 aaKnown RBP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 SLCO1A2P46721 670 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 RPS6KA1Q15418 735 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 PPP1R7Q15435 360 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 UAP1Q16222 522 aaPredicted RBP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 SNX29Q8TEQ0 813 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 ANAPC4Q9UJX5 808 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 LEMD3Q9Y2U8 911 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 KCPQ6ZWJ8 1503 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 GRID2IPA4D2P6 1211 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 CHUKO15111 745 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 TTI1O43156 1089 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 SART1O43290 800 aaKnown RBP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 FSBPO95073 299 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 TNNI2P48788 182 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 RCAN1P53805 252 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 NAA25Q14CX7 972 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 FAM133BQ5BKY9 247 aaKnown RBP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 HIBCHQ6NVY1 386 aaPredicted RBP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 CCDC84Q86UT8 332 aaPredicted RBP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 ZNF34Q8IZ26 560 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 ZNF444Q8N0Y2 327 aaPredicted RBP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 TGFBRAP1Q8WUH2 860 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 NSUN4Q96CB9 384 aaKnown RBP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 PIGSQ96S52 555 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 TRIM51Q9BSJ1 452 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 VCPKMTQ9H867 229 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 STXBP3O00186 592 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 SLC37A4O43826 429 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 PAX7P23759 505 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 AMPD3Q01432 767 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 DHX9Q08211 1270 aaKnown RBP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 NONOQ15233 471 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMC1B-202ENST00000404354 CENPPQ6IPU0 288 aa10.51□□□□□ -0.73
SMC1B-202ENST00000404354 CYB5D1Q6P9G0 228 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms