RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 CARD6Q9BX69 1037 aa11.96□□□□□ -0.5
LINC00649-202ENST00000400353 SEMA6BQ9H3T3 888 aa11.96□□□□□ -0.5
LINC00649-202ENST00000400353 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.5
LINC00649-202ENST00000400353 SH3BP1Q9Y3L3 701 aa11.96□□□□□ -0.5
LINC00649-202ENST00000400353 EPN1Q9Y6I3 576 aaPredicted RBP11.96□□□□□ -0.5
LINC00649-202ENST00000400353 SPDYE3A6NKU9 549 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 FAM196BA6NMK8 535 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 H2AFXP16104 143 aaPredicted RBP11.95□□□□□ -0.5
LINC00649-202ENST00000400353 ARHGAP4P98171 946 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 CDK17Q00537 523 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 IKQ13123 557 aaPredicted RBP11.95□□□□□ -0.5
LINC00649-202ENST00000400353 RSBN1LQ6PCB5 846 aaPredicted RBP11.95□□□□□ -0.5
LINC00649-202ENST00000400353 DYMQ7RTS9 669 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 CCDC170Q8IYT3 715 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 MYOCDQ8IZQ8 938 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 CSRNP1Q96S65 589 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 TTYH3Q9C0H2 523 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 LZTFL1Q9NQ48 299 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00649-202ENST00000400353 V9GYY5 206 aaPredicted RBP11.95□□□□□ -0.5
LINC00649-202ENST00000400353 CTAGE9A4FU28 777 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 USP17L15C9J2P7 530 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 USP17L13C9JLJ4 530 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 USP17L11C9JVI0 530 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 USP17L18D6R9N7 530 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 USP17L22D6RA61 530 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 USP17L17D6RBQ6 530 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 USP17L19D6RCP7 530 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 USP17L20D6RJB6 530 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 MEIS2O14770 477 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 FANCGO15287 622 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 NDUFA10O95299 355 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 GDF11O95390 407 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 GH2P01242 217 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 IDEP14735 1019 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 TRIM21P19474 475 aaKnown RBP11.95□□□□□ -0.5
LINC00649-202ENST00000400353 CIITAP33076 1130 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 SREBF1P36956 1147 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 USP17L24Q0WX57 530 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 COASYQ13057 564 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 ERCC6LQ2NKX8 1250 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 VWA3BQ502W6 1294 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 USP17L6PQ6QN14 398 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 ARHGAP27Q6ZUM4 889 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 CEP112Q8N8E3 955 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 EHBP1Q8NDI1 1231 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 SLC16A10Q8TF71 515 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 FAM151AQ8WW52 585 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 CRYGNQ8WXF5 182 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 NUDT12Q9BQG2 462 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 EDEM3Q9BZQ6 932 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 HAUS4Q9H6D7 363 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00649-202ENST00000400353 GOPCQ9HD26 462 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 PANK4Q9NVE7 773 aa11.95□□□□□ -0.5
LINC00649-202ENST00000400353 DDX41Q9UJV9 622 aaKnown RBP11.95□□□□□ -0.5
LINC00649-202ENST00000400353 PITPNM2Q9BZ72 1349 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 MYH7BA7E2Y1 1941 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 YDJCA8MPS7 323 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 PIK3CDO00329 1044 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 SOCS7O14512 581 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 GNA14O95837 355 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 CYP3A4P08684 503 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 MIIPQ5JXC2 388 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 ZNF569Q5MCW4 686 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 FAM26FQ5R3K3 315 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 FKBP1CQ5VVH2 108 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 FBXO38Q6PIJ6 1188 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 CCDC84Q86UT8 332 aaPredicted RBP11.94□□□□□ -0.5
LINC00649-202ENST00000400353 ACRBPQ8NEB7 543 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 GOLGA1Q92805 767 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 DNAJC19Q96DA6 116 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 PRMT6Q96LA8 375 aaPredicted RBP11.94□□□□□ -0.5
LINC00649-202ENST00000400353 PCMTD1Q96MG8 357 aaPredicted RBP11.94□□□□□ -0.5
LINC00649-202ENST00000400353 CEP63Q96MT8 703 aa11.94□□□□□ -0.5
LINC00649-202ENST00000400353 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 RNF225M0QZC1 329 aaPredicted RBP11.93□□□□□ -0.5
LINC00649-202ENST00000400353 IPO7O95373 1038 aaKnown RBP11.93□□□□□ -0.5
LINC00649-202ENST00000400353 VIL1P09327 827 aaKnown RBP11.93□□□□□ -0.5
LINC00649-202ENST00000400353 PLA2G4BP0C869 781 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 DLGAP5Q15398 846 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 KCNK18Q7Z418 384 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 GPR161Q8N6U8 529 aaKnown RBP11.93□□□□□ -0.5
LINC00649-202ENST00000400353 TTLL6Q8N841 843 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 ETNPPLQ8TBG4 499 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 NAPGQ99747 312 aaPredicted RBP11.93□□□□□ -0.5
LINC00649-202ENST00000400353 SH2D4AQ9H788 454 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 EHMT1Q9H9B1 1298 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 CDC23Q9UJX2 597 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 POTEB2H3BUK9 544 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 C21orf2O43822 256 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 TBC1D12O60347 775 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 PLA2G6O60733 806 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 SLURP2P0DP57 97 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 ARHGAP25P42331 645 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 FKBP3Q00688 224 aaKnown RBP11.93□□□□□ -0.5
LINC00649-202ENST00000400353 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 RABGGTAQ92696 567 aa11.93□□□□□ -0.5
LINC00649-202ENST00000400353 SLF1Q9BQI6 1058 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms