RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 ECEL1O95672 775 aa9.03□□□□□ -0.96
CHD8-201ENST00000399982 PPP2R2AP63151 447 aa9.03□□□□□ -0.96
CHD8-201ENST00000399982 KRT40Q6A162 431 aa9.03□□□□□ -0.96
CHD8-201ENST00000399982 CHST3Q7LGC8 479 aa9.03□□□□□ -0.96
CHD8-201ENST00000399982 GPCPD1Q9NPB8 672 aa9.03□□□□□ -0.96
CHD8-201ENST00000399982 PPIP5K1Q6PFW1 1433 aa9.03□□□□□ -0.96
CHD8-201ENST00000399982 ITSN2Q9NZM3 1697 aa9.03□□□□□ -0.96
CHD8-201ENST00000399982 PCP11498 1178 aaKnown RBP9.02□□□□□ -0.96
CHD8-201ENST00000399982 LVRNQ6Q4G3 990 aa9.02□□□□□ -0.96
CHD8-201ENST00000399982 KCTD17Q8N5Z5 321 aa9.02□□□□□ -0.96
CHD8-201ENST00000399982 KIF2CQ99661 725 aa9.02□□□□□ -0.96
CHD8-201ENST00000399982 AZI2Q9H6S1 392 aa9.02□□□□□ -0.96
CHD8-201ENST00000399982 TRIM33Q9UPN9 1127 aa9.02□□□□□ -0.96
CHD8-201ENST00000399982 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.02□□□□□ -0.96
CHD8-201ENST00000399982 ARHGEF35A5YM69 484 aa9.02□□□□□ -0.96
CHD8-201ENST00000399982 TNNI1P19237 187 aa9.02□□□□□ -0.96
CHD8-201ENST00000399982 ZYXQ15942 572 aaKnown RBP9.02□□□□□ -0.96
CHD8-201ENST00000399982 TMED8Q6PL24 325 aaPredicted RBP9.02□□□□□ -0.96
CHD8-201ENST00000399982 ZNF654Q8IZM8 581 aa9.02□□□□□ -0.96
CHD8-201ENST00000399982 EPN3Q9H201 632 aa9.02□□□□□ -0.96
CHD8-201ENST00000399982 TSC22D4Q9Y3Q8 395 aa9.02□□□□□ -0.96
CHD8-201ENST00000399982 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.02□□□□□ -0.96
CHD8-201ENST00000399982 C4BPBP20851 252 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 POLR2BP30876 1174 aaKnown RBP9.02□□□□□ -0.97
CHD8-201ENST00000399982 SOX5P35711 763 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 MRPS15P82914 257 aaKnown RBP9.02□□□□□ -0.97
CHD8-201ENST00000399982 USHBP1Q8N6Y0 703 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 DESI2Q9BSY9 194 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 PITPNM3Q9BZ71 974 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 SAP30BPQ9UHR5 308 aaKnown RBP9.02□□□□□ -0.97
CHD8-201ENST00000399982 MAPK8IP1Q9UQF2 711 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 NSFP46459 744 aaKnown RBP9.02□□□□□ -0.97
CHD8-201ENST00000399982 DEFA1P59665 94 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 DEFA3P59666 94 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 YWHAHQ04917 246 aaPredicted RBP9.02□□□□□ -0.97
CHD8-201ENST00000399982 BFSP1Q12934 665 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 INAQ16352 499 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 MYOCDQ8IZQ8 938 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 SETDB2Q96T68 719 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 DDX28Q9NUL7 540 aaKnown RBP9.02□□□□□ -0.97
CHD8-201ENST00000399982 ATP5J2-PTCD1G3V325 749 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 HNRNPRO43390 633 aaKnown RBP9.02□□□□□ -0.97
CHD8-201ENST00000399982 FMNL1O95466 1100 aaPredicted RBP9.02□□□□□ -0.97
CHD8-201ENST00000399982 KRT14P02533 472 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 STAT2P52630 851 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 GRAMD1BQ3KR37 738 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 LRIG3Q6UXM1 1119 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 NOSTRINQ8IVI9 506 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 GDAP1Q8TB36 358 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 JDP2Q8WYK2 163 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 TCEANC2Q96MN5 208 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 SORBS3O60504 671 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 CCDC22O60826 627 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 WDR75Q8IWA0 830 aaKnown RBP9.02□□□□□ -0.97
CHD8-201ENST00000399982 APPBP2Q92624 585 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 ATP6V1G3Q96LB4 118 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 AK8Q96MA6 479 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 FANCLQ9NW38 375 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 TUBA8Q9NY65 449 aaPredicted RBP9.02□□□□□ -0.97
CHD8-201ENST00000399982 INPP5FQ9Y2H2 1132 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 ADGRL1O94910 1474 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 VCAM1P19320 739 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 FAM69CQ0P6D2 419 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 LETM2Q2VYF4 491 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 CEP55Q53EZ4 464 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 CEP78Q5JTW2 689 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 RINT1Q6NUQ1 792 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 NCLNQ969V3 563 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 SYNDIG1Q9H7V2 258 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 UTP6Q9NYH9 597 aaKnown RBP9.02□□□□□ -0.97
CHD8-201ENST00000399982 SBNO1A3KN83 1393 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 PRAG1Q86YV5 1406 aa9.02□□□□□ -0.97
CHD8-201ENST00000399982 MSH2P43246 934 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 AHI1Q8N157 1196 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 COG1Q8WTW3 980 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 GID8Q9NWU2 228 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 ARMCX3Q9UH62 379 aaPredicted RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 MIF4GDA9UHW6 222 aaKnown RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 ADCY3O60266 1144 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 TRPC1P48995 793 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 PATL1Q86TB9 770 aaKnown RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 HORMAD1Q86X24 394 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 MYCT1Q8N699 235 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 ZNF483Q8TF39 744 aaPredicted RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 TRIM63Q969Q1 353 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 COL17A1Q9UMD9 1497 aaPredicted RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 KIAA0232Q92628 1395 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 TSHZ3Q63HK5 1081 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 NCAPH2Q6IBW4 605 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 KRT27Q7Z3Y8 459 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 HNRNPLLQ8WVV9 542 aaKnown RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 NAF1Q96HR8 494 aaKnown RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 DNM3Q9UQ16 869 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 CTIFO43310 598 aaKnown RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 PARP1P09874 1014 aaKnown RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 ZSCAN20P17040 1043 aaPredicted RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 KIF19Q2TAC6 998 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 C1orf228Q6PIY5 440 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 CRLF3Q8IUI8 442 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 DDI1Q8WTU0 396 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms