RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 ANO5Q75V66 913 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 FAM133AQ8N9E0 248 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 IP6K1Q92551 441 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 EHMT1Q9H9B1 1298 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 IFT122Q9HBG6 1241 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 ZCCHC17Q9NP64 241 aaKnown RBP10.39□□□□□ -0.75
SMAD9-203ENST00000399275 SYBUQ9NX95 663 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 MAN1B1Q9UKM7 699 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 MAPK8IP1Q9UQF2 711 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 SEMA3EO15041 775 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 MEFVO15553 781 aaPredicted RBP10.39□□□□□ -0.75
SMAD9-203ENST00000399275 SERPINB10P48595 397 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 ANGPT1Q15389 498 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 EMBQ6PCB8 327 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 POTEEQ6S8J3 1075 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 PIK3AP1Q6ZUJ8 805 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 NAP1L4Q99733 375 aaKnown RBP10.39□□□□□ -0.75
SMAD9-203ENST00000399275 DLGAP2Q9P1A6 1054 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 ANKFY1Q9P2R3 1169 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 BAG5Q9UL15 447 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 UNC13BO14795 1591 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 CORO7P57737 925 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 NYAP1Q6ZVC0 841 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 UBL4BQ8N7F7 174 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 FAM81BQ96LP2 452 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 RPAP3Q9H6T3 665 aaPredicted RBP10.39□□□□□ -0.75
SMAD9-203ENST00000399275 SLC38A10Q9HBR0 1119 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 ORC6Q9Y5N6 252 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 TRAF5O00463 557 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 CYP21A2P08686 494 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 HSPA9P38646 679 aaKnown RBP10.39□□□□□ -0.75
SMAD9-203ENST00000399275 EIF2B2P49770 351 aaKnown RBP10.39□□□□□ -0.75
SMAD9-203ENST00000399275 SLC39A6Q13433 755 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 C2CD5Q86YS7 1000 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 ATP11CQ8NB49 1132 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 XAGE2Q96GT9 111 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 CLIC6Q96NY7 704 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 QKIQ96PU8 341 aaKnown RBP eCLIP10.39□□□□□ -0.75
SMAD9-203ENST00000399275 NUDCD1Q96RS6 583 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 TRIM56Q9BRZ2 755 aaKnown RBP10.39□□□□□ -0.75
SMAD9-203ENST00000399275 PRDM11Q9NQV5 511 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 EMC3Q9P0I2 261 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 MAD1L1Q9Y6D9 718 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 MBD4O95243 580 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 EEF1GP26641 437 aaKnown RBP10.38□□□□□ -0.75
SMAD9-203ENST00000399275 MAIP1Q8WWC4 291 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 ANKRD2Q9GZV1 360 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 SUCLA2Q9P2R7 463 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-203ENST00000399275 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMAD9-203ENST00000399275 P4HA2O15460 535 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 ZNF827Q17R98 1081 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 FSCBQ5H9T9 825 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 KAZNQ674X7 775 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 CCDC105Q8IYK2 499 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 MAML3Q96JK9 1138 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 CCDC87Q9NVE4 849 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 KCNJ14Q9UNX9 436 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 SH3TC1Q8TE82 1336 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 GSTO1P78417 241 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 FMR1NBQ8N0W7 255 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-203ENST00000399275 BLZF1Q9H2G9 400 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 IQSEC2Q5JU85 1478 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 WDR91A4D1P6 747 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 MAPK13O15264 365 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 PAX3P23760 479 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 GPTP24298 496 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 GET4Q7L5D6 327 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-203ENST00000399275 FAM81AQ8TBF8 368 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 EFHD2Q96C19 240 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-203ENST00000399275 FOXP1Q9H334 677 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-203ENST00000399275 VIPAS39Q9H9C1 493 aa10.38□□□□□ -0.75
SMAD9-203ENST00000399275 V9GY48 417 aaPredicted RBP10.38□□□□□ -0.75
SMAD9-203ENST00000399275 LCA5LO95447 670 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 TBC1D8O95759 1140 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 GNA14O95837 355 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 KRT6AP02538 564 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 KRT6BP04259 564 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 KRT6CP48668 564 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 IL1RL1Q01638 556 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 TFAP4Q01664 338 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 KLHL30Q0D2K2 578 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 AP1B1Q10567 949 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 RRAGAQ7L523 313 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 TRIM74Q86UV6 250 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 TRIM73Q86UV7 250 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 MSL3Q8N5Y2 521 aaKnown RBP10.37□□□□□ -0.75
SMAD9-203ENST00000399275 LRRC59Q96AG4 307 aaKnown RBP10.37□□□□□ -0.75
SMAD9-203ENST00000399275 KIF1BO60333 1816 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 MADDQ8WXG6 1647 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 GOLGA8RI6L899 631 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 SPOPO43791 374 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 MFAP3LO75121 409 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 ATP1A3P13637 1013 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 TOB2Q14106 344 aaPredicted RBP10.37□□□□□ -0.75
SMAD9-203ENST00000399275 IQCB1Q15051 598 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 ARMCX5Q6P1M9 558 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 TOGARAM2Q6ZUX3 1019 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 ICA1LQ8NDH6 482 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 CATSPER2Q96P56 530 aa10.37□□□□□ -0.75
SMAD9-203ENST00000399275 ELAC2Q9BQ52 826 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms