RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 MSH4O15457 936 aa28.71■■■□□ 2.19
SHARPIN-202ENST00000398712 EGFRP00533 1210 aa28.71■■■□□ 2.19
SHARPIN-202ENST00000398712 GYPCP04921 128 aa28.71■■■□□ 2.19
SHARPIN-202ENST00000398712 CASP14P31944 242 aa28.71■■■□□ 2.19
SHARPIN-202ENST00000398712 NCAPH2Q6IBW4 605 aa28.71■■■□□ 2.19
SHARPIN-202ENST00000398712 CPLX3Q8WVH0 158 aa28.71■■■□□ 2.19
SHARPIN-202ENST00000398712 HPS3Q969F9 1004 aa28.71■■■□□ 2.19
SHARPIN-202ENST00000398712 A0A1W2PQC6 194 aa28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 E9PMD0 336 aa28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 WDR46O15213 610 aaKnown RBP28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 CTNND1O60716 968 aaKnown RBP28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 FGFR1OPO95684 399 aaKnown RBP28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 SSBP05455 408 aaKnown RBP eCLIP28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 PTGER2P43116 358 aa28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 RASSF7Q02833 373 aa28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 LDHDQ86WU2 507 aa28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 MB21D1Q8N884 522 aa28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 CNOT7Q9UIV1 285 aaKnown RBP28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 PPP2R2CQ9Y2T4 447 aa28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 GJA3Q9Y6H8 435 aa28.7■■■□□ 2.19
SHARPIN-202ENST00000398712 MED24O75448 989 aa28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 RPA1P27694 616 aa28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 DNM2P50570 870 aa28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 COASYQ13057 564 aa28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 FOXR2Q6PJQ5 311 aa28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 CCDC84Q86UT8 332 aaPredicted RBP28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 CCDC65Q8IXS2 484 aa28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 CNOT6LQ96LI5 555 aaKnown RBP28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 TUBGCP2Q9BSJ2 902 aa28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 KIAA1683Q9H0B3 1180 aa28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 SEMA6BQ9H3T3 888 aa28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 PANK4Q9NVE7 773 aa28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 FBXO28Q9NVF7 368 aa28.7■■■□□ 2.18
SHARPIN-202ENST00000398712 LRRC63Q05C16 580 aa28.69■■■□□ 2.18
SHARPIN-202ENST00000398712 REXO1L1PQ8IX06 675 aa28.69■■■□□ 2.18
SHARPIN-202ENST00000398712 HACL1Q9UJ83 578 aa28.69■■■□□ 2.18
SHARPIN-202ENST00000398712 SCAF8Q9UPN6 1271 aaKnown RBP28.69■■■□□ 2.18
SHARPIN-202ENST00000398712 SAMD1Q6SPF0 538 aaPredicted RBP28.68■■■□□ 2.18
SHARPIN-202ENST00000398712 SAMD7Q7Z3H4 446 aa28.68■■■□□ 2.18
SHARPIN-202ENST00000398712 GPBP1Q86WP2 473 aa28.68■■■□□ 2.18
SHARPIN-202ENST00000398712 ZNF507Q8TCN5 953 aa28.68■■■□□ 2.18
SHARPIN-202ENST00000398712 DEFB129Q9H1M3 183 aa28.68■■■□□ 2.18
SHARPIN-202ENST00000398712 IGLV3-22A0A075B6J6 115 aa28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 PES1O00541 588 aaKnown RBP28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 ICAM1P05362 532 aa28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 PRKCSHP14314 528 aaPredicted RBP28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 KIF4BQ2VIQ3 1234 aa28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 TBC1D10BQ4KMP7 808 aaPredicted RBP28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 CATSPER3Q86XQ3 398 aa28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 KCTD17Q8N5Z5 321 aa28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 PRPF38AQ8NAV1 312 aaKnown RBP28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 TBC1D5Q92609 795 aa28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 TSG101Q99816 390 aa28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 SLF1Q9BQI6 1058 aa28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 VAV3Q9UKW4 847 aa28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 FECHP22830 423 aa28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 MTIF2P46199 727 aaKnown RBP28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 FXR1P51114 621 aaKnown RBP eCLIP28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 FAM26FQ5R3K3 315 aa28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 DNM3Q9UQ16 869 aa28.67■■■□□ 2.18
SHARPIN-202ENST00000398712 PITPNM2Q9BZ72 1349 aa28.66■■■□□ 2.18
SHARPIN-202ENST00000398712 POTEFA5A3E0 1075 aa28.66■■■□□ 2.18
SHARPIN-202ENST00000398712 POTEIP0CG38 1075 aa28.66■■■□□ 2.18
SHARPIN-202ENST00000398712 INPP5BP32019 993 aa28.66■■■□□ 2.18
SHARPIN-202ENST00000398712 DCAF15Q66K64 600 aa28.66■■■□□ 2.18
SHARPIN-202ENST00000398712 POTEGQ6S5H5 508 aa28.66■■■□□ 2.18
SHARPIN-202ENST00000398712 POTEEQ6S8J3 1075 aa28.66■■■□□ 2.18
SHARPIN-202ENST00000398712 MYOCDQ8IZQ8 938 aa28.66■■■□□ 2.18
SHARPIN-202ENST00000398712 CCPG1Q9ULG6 757 aa28.66■■■□□ 2.18
SHARPIN-202ENST00000398712 RABGAP1Q9Y3P9 1069 aa28.66■■■□□ 2.18
SHARPIN-202ENST00000398712 CYP11B2P19099 503 aa28.65■■■□□ 2.18
SHARPIN-202ENST00000398712 SLC12A3P55017 1021 aa28.65■■■□□ 2.18
SHARPIN-202ENST00000398712 CYP2W1Q8TAV3 490 aa28.65■■■□□ 2.18
SHARPIN-202ENST00000398712 POLR3CQ9BUI4 534 aaPredicted RBP28.65■■■□□ 2.18
SHARPIN-202ENST00000398712 ETF1P62495 437 aaKnown RBP28.65■■■□□ 2.18
SHARPIN-202ENST00000398712 TOGARAM2Q6ZUX3 1019 aa28.65■■■□□ 2.18
SHARPIN-202ENST00000398712 HOOK2Q96ED9 719 aa28.65■■■□□ 2.18
SHARPIN-202ENST00000398712 ABHD10Q9NUJ1 306 aa28.65■■■□□ 2.18
SHARPIN-202ENST00000398712 GOLGB1Q14789 3259 aaKnown RBP28.64■■■□□ 2.18
SHARPIN-202ENST00000398712 CTIFO43310 598 aaKnown RBP28.64■■■□□ 2.18
SHARPIN-202ENST00000398712 KIF20AO95235 890 aa28.64■■■□□ 2.18
SHARPIN-202ENST00000398712 KRT18P05783 430 aaKnown RBP28.64■■■□□ 2.18
SHARPIN-202ENST00000398712 SPATA31C1P0DKV0 1188 aa28.64■■■□□ 2.18
SHARPIN-202ENST00000398712 TMTC1Q8IUR5 882 aa28.64■■■□□ 2.18
SHARPIN-202ENST00000398712 DOCK1Q14185 1865 aa28.64■■■□□ 2.18
SHARPIN-202ENST00000398712 SOWAHDA6NJG2 315 aa28.63■■■□□ 2.17
SHARPIN-202ENST00000398712 B4DLN1 442 aa28.63■■■□□ 2.17
SHARPIN-202ENST00000398712 CCDC175P0C221 793 aa28.63■■■□□ 2.17
SHARPIN-202ENST00000398712 SYT10Q6XYQ8 523 aa28.63■■■□□ 2.17
SHARPIN-202ENST00000398712 WDR18Q9BV38 432 aa28.63■■■□□ 2.17
SHARPIN-202ENST00000398712 NOC4LQ9BVI4 516 aaKnown RBP28.63■■■□□ 2.17
SHARPIN-202ENST00000398712 ASTN2O75129 1339 aaPredicted RBP28.63■■■□□ 2.17
SHARPIN-202ENST00000398712 PHLPP2Q6ZVD8 1323 aa28.63■■■□□ 2.17
SHARPIN-202ENST00000398712 HSD17B4P51659 736 aa28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 PRELPP51888 382 aa28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 SETQ01105 290 aaPredicted RBP28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 CEP55Q53EZ4 464 aa28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 SYT2Q8N9I0 419 aaPredicted RBP28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 SLC5A5Q92911 643 aa28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 NUP58Q9BVL2 599 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms