RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 KRT25Q7Z3Z0 450 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.11■□□□□ 0.652e-7■■■■■ 64.2
EWSR1-206ENST00000397938 PLCB1Q9NQ66 1216 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 PVALEFA0A1B0GWK0 134 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 MYMKA6NI61 221 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 CHUKO15111 745 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 ZPR1O75312 459 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 RASSF9O75901 435 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 SERPING1P05155 500 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 TNNC1P63316 161 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 TFAP4Q01664 338 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 CCDC40Q4G0X9 1142 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 ARFGAP2Q8N6H7 521 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 SYN2Q92777 582 aaPredicted RBP19.11■□□□□ 0.65
EWSR1-206ENST00000397938 NUCKS1Q9H1E3 243 aaKnown RBP19.11■□□□□ 0.65
EWSR1-206ENST00000397938 CEP72Q9P209 647 aa19.11■□□□□ 0.65
EWSR1-206ENST00000397938 TLR2O60603 784 aa19.1■□□□□ 0.65
EWSR1-206ENST00000397938 KLRC1P26715 233 aa19.1■□□□□ 0.65
EWSR1-206ENST00000397938 EIF1ADQ8N9N8 165 aaKnown RBP19.1■□□□□ 0.65
EWSR1-206ENST00000397938 ZKSCAN4Q969J2 545 aaPredicted RBP19.1■□□□□ 0.65
EWSR1-206ENST00000397938 FAM84BQ96KN1 310 aaPredicted RBP19.1■□□□□ 0.65
EWSR1-206ENST00000397938 TAF1DQ9H5J8 278 aaPredicted RBP19.1■□□□□ 0.65
EWSR1-206ENST00000397938 KLC4Q9NSK0 619 aa19.1■□□□□ 0.65
EWSR1-206ENST00000397938 BLOC1S4Q9NUP1 217 aa19.1■□□□□ 0.65
EWSR1-206ENST00000397938 GOLGA6L10A6NI86 522 aa19.1■□□□□ 0.65
EWSR1-206ENST00000397938 GRB10Q13322 594 aa19.1■□□□□ 0.65
EWSR1-206ENST00000397938 NONOQ15233 471 aaKnown RBP eCLIP19.1■□□□□ 0.656e-6■■■■□ 21
EWSR1-206ENST00000397938 SFMBT2Q5VUG0 894 aa19.1■□□□□ 0.65
EWSR1-206ENST00000397938 USP38Q8NB14 1042 aa19.1■□□□□ 0.65
EWSR1-206ENST00000397938 CYFIP2Q96F07 1278 aa19.1■□□□□ 0.65
EWSR1-206ENST00000397938 ZMYND12Q9H0C1 365 aa19.1■□□□□ 0.65
EWSR1-206ENST00000397938 CD248Q9HCU0 757 aa19.1■□□□□ 0.65
EWSR1-206ENST00000397938 NLRC4Q9NPP4 1024 aa19.1■□□□□ 0.65
EWSR1-206ENST00000397938 TACO1Q9BSH4 297 aaKnown RBP19.09■□□□□ 0.65
EWSR1-206ENST00000397938 ISCUQ9H1K1 167 aa19.09■□□□□ 0.65
EWSR1-206ENST00000397938 STK17AQ9UEE5 414 aa19.09■□□□□ 0.65
EWSR1-206ENST00000397938 TMEM59LQ9UK28 342 aa19.09■□□□□ 0.65
EWSR1-206ENST00000397938 CCDC172P0C7W6 258 aa19.09■□□□□ 0.65
EWSR1-206ENST00000397938 NEK8Q86SG6 692 aa19.09■□□□□ 0.65
EWSR1-206ENST00000397938 C3orf20Q8ND61 904 aa19.09■□□□□ 0.65
EWSR1-206ENST00000397938 TANGO6Q9C0B7 1094 aa19.09■□□□□ 0.65
EWSR1-206ENST00000397938 PACSIN2Q9UNF0 486 aaPredicted RBP19.09■□□□□ 0.65
EWSR1-206ENST00000397938 CCDC88AQ3V6T2 1871 aa19.09■□□□□ 0.65
EWSR1-206ENST00000397938 NOL4O94818 638 aa19.08■□□□□ 0.65
EWSR1-206ENST00000397938 ERCC3P19447 782 aa19.08■□□□□ 0.65
EWSR1-206ENST00000397938 HPDP32754 393 aaPredicted RBP19.08■□□□□ 0.65
EWSR1-206ENST00000397938 EHHADHQ08426 723 aa19.08■□□□□ 0.65
EWSR1-206ENST00000397938 BRINP3Q76B58 766 aa19.08■□□□□ 0.65
EWSR1-206ENST00000397938 PPANQ9NQ55 473 aaKnown RBP19.08■□□□□ 0.65
EWSR1-206ENST00000397938 ATP6V0A2Q9Y487 856 aa19.08■□□□□ 0.65
EWSR1-206ENST00000397938 KAT6BQ8WYB5 2073 aa19.08■□□□□ 0.65
EWSR1-206ENST00000397938 MAST2Q6P0Q8 1798 aa19.08■□□□□ 0.65
EWSR1-206ENST00000397938 GCOM1H8Y6P7 765 aaPredicted RBP19.08■□□□□ 0.64
EWSR1-206ENST00000397938 MYZAPP0CAP1 466 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 ECHS1P30084 290 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 HSD17B3P37058 310 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 ERVK-9P63128 1117 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 SLC18A3Q16572 532 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 FAM83BQ5T0W9 1011 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 FOXR2Q6PJQ5 311 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 ACTR5Q9H9F9 607 aaPredicted RBP19.08■□□□□ 0.64
EWSR1-206ENST00000397938 SLC40A1Q9NP59 571 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 SLC12A6Q9UHW9 1150 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 H0YGN5 161 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 CAMTA2O94983 1202 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 DYMQ7RTS9 669 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 KLHL7Q8IXQ5 586 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 LARP4BQ92615 738 aaKnown RBP19.08■□□□□ 0.64
EWSR1-206ENST00000397938 PNMA5Q96PV4 448 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 TSG101Q99816 390 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 MCM9Q9NXL9 1143 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 NFS1Q9Y697 457 aa19.08■□□□□ 0.64
EWSR1-206ENST00000397938 CES2O00748 559 aa19.07■□□□□ 0.64
EWSR1-206ENST00000397938 NT5C2P49902 561 aa19.07■□□□□ 0.64
EWSR1-206ENST00000397938 NAPAP54920 295 aa19.07■□□□□ 0.64
EWSR1-206ENST00000397938 RNASE9P60153 205 aaKnown RBP19.07■□□□□ 0.64
EWSR1-206ENST00000397938 HLTFQ14527 1009 aaKnown RBP eCLIP19.07■□□□□ 0.64
EWSR1-206ENST00000397938 SLC4A8Q2Y0W8 1093 aa19.07■□□□□ 0.64
EWSR1-206ENST00000397938 PROM2Q8N271 834 aa19.07■□□□□ 0.64
EWSR1-206ENST00000397938 RIC8AQ9NPQ8 531 aa19.07■□□□□ 0.64
EWSR1-206ENST00000397938 GMNCA6NCL1 334 aa19.07■□□□□ 0.64
EWSR1-206ENST00000397938 PALM3A6NDB9 673 aaPredicted RBP19.07■□□□□ 0.64
EWSR1-206ENST00000397938 USP17L8P0C7I0 530 aa19.07■□□□□ 0.64
EWSR1-206ENST00000397938 HOXA7P31268 230 aaPredicted RBP19.07■□□□□ 0.64
EWSR1-206ENST00000397938 RDXP35241 583 aaKnown RBP19.07■□□□□ 0.64
EWSR1-206ENST00000397938 CUL1Q13616 776 aa19.07■□□□□ 0.64
EWSR1-206ENST00000397938 UAP1Q16222 522 aaPredicted RBP19.07■□□□□ 0.64
EWSR1-206ENST00000397938 PREPLQ4J6C6 727 aaPredicted RBP19.07■□□□□ 0.64
EWSR1-206ENST00000397938 CCDC121Q6ZUS5 278 aa19.07■□□□□ 0.64
EWSR1-206ENST00000397938 TBC1D5Q92609 795 aa19.07■□□□□ 0.64
EWSR1-206ENST00000397938 NIP7Q9Y221 180 aaKnown RBP eCLIP19.07■□□□□ 0.64
EWSR1-206ENST00000397938 ORC2Q13416 577 aaPredicted RBP19.06■□□□□ 0.64
EWSR1-206ENST00000397938 INTS5Q6P9B9 1019 aaKnown RBP19.06■□□□□ 0.64
EWSR1-206ENST00000397938 LSM14BQ9BX40 385 aaKnown RBP19.06■□□□□ 0.64
EWSR1-206ENST00000397938 TRAPPC3O43617 180 aa19.06■□□□□ 0.64
EWSR1-206ENST00000397938 ZNF844Q08AG5 666 aa19.06■□□□□ 0.64
EWSR1-206ENST00000397938 KIAA0753Q2KHM9 967 aa19.06■□□□□ 0.64
EWSR1-206ENST00000397938 FBXO33Q7Z6M2 555 aa19.06■□□□□ 0.64
EWSR1-206ENST00000397938 LRRC45Q96CN5 670 aa19.06■□□□□ 0.64
EWSR1-206ENST00000397938 PACSIN1Q9BY11 444 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms