RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 GRIPAP1Q4V328 841 aa12.28□□□□□ -0.44
IFT140-202ENST00000397417 TMTC1Q8IUR5 882 aa12.28□□□□□ -0.44
IFT140-202ENST00000397417 FAM133AQ8N9E0 248 aa12.28□□□□□ -0.44
IFT140-202ENST00000397417 SECISBP2LQ93073 1101 aaKnown RBP12.28□□□□□ -0.44
IFT140-202ENST00000397417 MRFAP1L1Q96HT8 127 aa12.28□□□□□ -0.44
IFT140-202ENST00000397417 AGBL1Q96MI9 1066 aa12.28□□□□□ -0.44
IFT140-202ENST00000397417 ELP3Q9H9T3 547 aa12.28□□□□□ -0.44
IFT140-202ENST00000397417 RNF146Q9NTX7 359 aa12.28□□□□□ -0.44
IFT140-202ENST00000397417 FMR1Q06787 632 aaKnown RBP eCLIP12.28□□□□□ -0.44
IFT140-202ENST00000397417 PDXDC2PQ6P474 469 aa12.28□□□□□ -0.44
IFT140-202ENST00000397417 SLFN12Q8IYM2 578 aa12.28□□□□□ -0.44
IFT140-202ENST00000397417 NAP1L4Q99733 375 aaKnown RBP12.28□□□□□ -0.44
IFT140-202ENST00000397417 TRAPPC10P48553 1259 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 STRIP1Q5VSL9 837 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 SFR1Q86XK3 245 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 SLC10A4Q96EP9 437 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 DYDC2Q96IM9 177 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 MMS19Q96T76 1030 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 NAA15Q9BXJ9 866 aaKnown RBP12.27□□□□□ -0.44
IFT140-202ENST00000397417 EPN1Q9Y6I3 576 aaPredicted RBP12.27□□□□□ -0.44
IFT140-202ENST00000397417 SYNJ2BP-COX16A0A087WUM0 186 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 ORC4O43929 436 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 INPP5BP32019 993 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 EHBP1Q8NDI1 1231 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 GBP3Q9H0R5 595 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 COX16Q9P0S2 106 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 ZNF70Q9UC06 446 aaPredicted RBP12.27□□□□□ -0.44
IFT140-202ENST00000397417 ADAMTS1Q9UHI8 967 aa12.27□□□□□ -0.44
IFT140-202ENST00000397417 FOSP01100 380 aaPredicted RBP12.27□□□□□ -0.45
IFT140-202ENST00000397417 CCDC172P0C7W6 258 aa12.27□□□□□ -0.45
IFT140-202ENST00000397417 DNM2P50570 870 aa12.27□□□□□ -0.45
IFT140-202ENST00000397417 EHHADHQ08426 723 aa12.27□□□□□ -0.45
IFT140-202ENST00000397417 RCSD1Q6JBY9 416 aa12.27□□□□□ -0.45
IFT140-202ENST00000397417 CAPN12Q6ZSI9 719 aa12.27□□□□□ -0.45
IFT140-202ENST00000397417 LDHDQ86WU2 507 aa12.27□□□□□ -0.45
IFT140-202ENST00000397417 SLC35F6Q8N357 371 aa12.27□□□□□ -0.45
IFT140-202ENST00000397417 DEFB129Q9H1M3 183 aa12.27□□□□□ -0.45
IFT140-202ENST00000397417 ABT1Q9ULW3 272 aaKnown RBP12.27□□□□□ -0.45
IFT140-202ENST00000397417 ZNF543Q08ER8 600 aa12.27□□□□□ -0.45
IFT140-202ENST00000397417 NCBP1Q09161 790 aaKnown RBP12.27□□□□□ -0.45
IFT140-202ENST00000397417 MAP9Q49MG5 647 aa12.27□□□□□ -0.45
IFT140-202ENST00000397417 LMBRD2Q68DH5 695 aaPredicted RBP12.27□□□□□ -0.45
IFT140-202ENST00000397417 GALNT17Q6IS24 598 aa12.27□□□□□ -0.45
IFT140-202ENST00000397417 FBXO2Q9UK22 296 aaPredicted RBP12.27□□□□□ -0.45
IFT140-202ENST00000397417 KDM3AQ9Y4C1 1321 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 TMOD1P28289 359 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 ETF1P62495 437 aaKnown RBP12.26□□□□□ -0.45
IFT140-202ENST00000397417 PPP2R5DQ14738 602 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 EXOC3L4Q17RC7 722 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 HOOK3Q86VS8 718 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 RPAP3Q9H6T3 665 aaPredicted RBP12.26□□□□□ -0.45
IFT140-202ENST00000397417 VPS18Q9P253 973 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 NXF1Q9UBU9 619 aaKnown RBP12.26□□□□□ -0.45
IFT140-202ENST00000397417 POLRMTO00411 1230 aaKnown RBP12.26□□□□□ -0.45
IFT140-202ENST00000397417 GFPT2O94808 682 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 DESP17661 470 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 CD58P19256 250 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 STAT1P42224 750 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 ZNF658Q5TYW1 1059 aaPredicted RBP12.26□□□□□ -0.45
IFT140-202ENST00000397417 THNSL1Q8IYQ7 743 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 TFR2Q9UP52 801 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 GPR75-ASB3A0A0A6YYF3 556 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 HPDP32754 393 aaPredicted RBP12.26□□□□□ -0.45
IFT140-202ENST00000397417 MTMR1Q13613 665 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 MCF2L2Q86YR7 1114 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 AKT3Q9Y243 479 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 TTLL3Q9Y4R7 772 aa12.26□□□□□ -0.45
IFT140-202ENST00000397417 ADAMTSL3P82987 1691 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 GUCY2FP51841 1108 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 FKBP3Q00688 224 aaKnown RBP12.25□□□□□ -0.45
IFT140-202ENST00000397417 VGLL2Q8N8G2 317 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 PRR12Q9ULL5 1215 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 TCRBV5S4A2TA0A5A2 114 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 KCNK3O14649 394 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 FTCDO95954 541 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 CXCL9Q07325 125 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 STK4Q13043 487 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 DGKZQ13574 1117 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 BMS1Q14692 1282 aaKnown RBP12.25□□□□□ -0.45
IFT140-202ENST00000397417 SCARA5Q6ZMJ2 495 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 LRP10Q7Z4F1 713 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 ALDH8A1Q9H2A2 487 aaPredicted RBP12.25□□□□□ -0.45
IFT140-202ENST00000397417 JMJD4Q9H9V9 463 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 IMPACTQ9P2X3 320 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 HYOU1Q9Y4L1 999 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 CACNA1FO60840 1977 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 IFNB1P01574 187 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 TRIM49P0CI25 452 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 TRIM49CP0CI26 452 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 MAP3K9P80192 1104 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 TFAMQ00059 246 aaKnown RBP12.25□□□□□ -0.45
IFT140-202ENST00000397417 DMP1Q13316 513 aaPredicted RBP12.25□□□□□ -0.45
IFT140-202ENST00000397417 DCUN1D2Q6PH85 259 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 OTUD6AQ7L8S5 288 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 DAAM2Q86T65 1068 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 CDR2LQ86X02 465 aaPredicted RBP12.25□□□□□ -0.45
IFT140-202ENST00000397417 FAM186BQ8IYM0 893 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 SLC7A3Q8WY07 619 aa12.25□□□□□ -0.45
IFT140-202ENST00000397417 BBXQ8WY36 941 aaPredicted RBP12.25□□□□□ -0.45
IFT140-202ENST00000397417 PPP1R13BQ96KQ4 1090 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms