RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 KCNJ12Q14500 433 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 CDC37Q16543 378 aaPredicted RBP10.88□□□□□ -0.67
APTX-207ENST00000397172 MEA1Q16626 185 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 TNNI3KQ59H18 835 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 TCP11X2Q5H9J9 407 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 ZMYM1Q5SVZ6 1142 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 KLHL10Q6JEL2 608 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 CREG2Q8IUH2 290 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 C7orf43Q8WVR3 580 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 STAMBPL1Q96FJ0 436 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 YIPF3Q9GZM5 350 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 CTNNAL1Q9UBT7 734 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 BCS1LQ9Y276 419 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 LEMD3Q9Y2U8 911 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 FPGT-TNNI3KV9GXZ4 949 aa10.88□□□□□ -0.67
APTX-207ENST00000397172 A6NHS1 94 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 PPEF1O14829 653 aaPredicted RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 ACTN4O43707 911 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 ORC4O43929 436 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 GRIN3BO60391 1043 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 WFS1O76024 890 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 ALADP13716 330 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 IGHMBP2P38935 993 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 CCT6AP40227 531 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 IARSP41252 1262 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 DNM2P50570 870 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 HERVK_113P62684 666 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 ZBED6P86452 979 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 PAK1Q13153 545 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 CUL3Q13618 768 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 LBRQ14739 615 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 ZRSR2Q15696 482 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 CMPK2Q5EBM0 449 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 HAUS3Q68CZ6 603 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 MTHFD1LQ6UB35 978 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 ARHGAP22Q7Z5H3 698 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 NOSTRINQ8IVI9 506 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 SP8Q8IXZ3 490 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 GALNT15Q8N3T1 639 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 FAM81AQ8TBF8 368 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 CELF1Q92879 486 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 CHMP6Q96FZ7 201 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 L3MBTL3Q96JM7 780 aaPredicted RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 CCDC85AQ96PX6 553 aaPredicted RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 FOXP1Q9H334 677 aaPredicted RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 COPRSQ9NQ92 184 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 SEC31BQ9NQW1 1179 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 ANAPC4Q9UJX5 808 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 B4DLN1 442 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 SKAP2O75563 359 aaPredicted RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 NPTXRO95502 500 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 CLTAP09496 248 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 ATP2A2P16615 1042 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 HPDP32754 393 aaPredicted RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 EIF3BP55884 814 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 MXRA7P84157 204 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 CCDC96Q2M329 555 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 SPDYCQ5MJ68 293 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 PNMA8AQ86V59 439 aaPredicted RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 FAM114A1Q8IWE2 563 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 RBM12BQ8IXT5 1001 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 RNF10Q8N5U6 811 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 FBF1Q8TES7 1133 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 FERMT2Q96AC1 680 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 CCDC42Q96M95 316 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 RAB3IPQ96QF0 476 aaPredicted RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 TRIM4Q9C037 500 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 AATFQ9NY61 560 aaKnown RBP eCLIP10.87□□□□□ -0.67
APTX-207ENST00000397172 TLR7Q9NYK1 1049 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 DMGDHQ9UI17 866 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 SLC12A4Q9UP95 1085 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 PLAAQ9Y263 795 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 REXO2Q9Y3B8 237 aaKnown RBP10.87□□□□□ -0.67
APTX-207ENST00000397172 ATP6V0A2Q9Y487 856 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 PCDHGC5Q9Y5F6 944 aa10.87□□□□□ -0.67
APTX-207ENST00000397172 ARFGEF1Q9Y6D6 1849 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 LGALS16A8MUM7 142 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 RNF113AO15541 343 aaKnown RBP10.86□□□□□ -0.67
APTX-207ENST00000397172 ATP4AP20648 1035 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 ALDH3A1P30838 453 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 SSRP1Q08945 709 aaKnown RBP10.86□□□□□ -0.67
APTX-207ENST00000397172 GPR162Q16538 588 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 SPATA21Q7Z572 469 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 HOOK3Q86VS8 718 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 TRIM22Q8IYM9 498 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 RTKN2Q8IZC4 609 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 MB21D1Q8N884 522 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 CFAP61Q8NHU2 1237 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 EZH1Q92800 747 aaPredicted RBP10.86□□□□□ -0.67
APTX-207ENST00000397172 OSBPL1AQ9BXW6 950 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 STMN4Q9H169 189 aaPredicted RBP10.86□□□□□ -0.67
APTX-207ENST00000397172 VPS16Q9H269 839 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 PAG1Q9NWQ8 432 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 SLC5A4Q9NY91 659 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 FBXO2Q9UK22 296 aaPredicted RBP10.86□□□□□ -0.67
APTX-207ENST00000397172 CTNND2Q9UQB3 1225 aa10.86□□□□□ -0.67
APTX-207ENST00000397172 GOLGB1Q14789 3259 aaKnown RBP10.86□□□□□ -0.67
APTX-207ENST00000397172 SLX4Q8IY92 1834 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 A0A1W2PQJ5 194 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 PDE2AO00408 941 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms