RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 DUSP9Q99956 384 aaKnown RBP17.96■□□□□ 0.47
SNX6-202ENST00000396526 BCS1LQ9Y276 419 aa17.96■□□□□ 0.47
SNX6-202ENST00000396526 CTIFO43310 598 aaKnown RBP17.96■□□□□ 0.46
SNX6-202ENST00000396526 IPO7O95373 1038 aaKnown RBP17.96■□□□□ 0.46
SNX6-202ENST00000396526 FOXR2Q6PJQ5 311 aa17.96■□□□□ 0.46
SNX6-202ENST00000396526 KIAA0895Q8NCT3 520 aa17.96■□□□□ 0.46
SNX6-202ENST00000396526 RANBP17Q9H2T7 1088 aaKnown RBP17.96■□□□□ 0.46
SNX6-202ENST00000396526 RPA1P27694 616 aa17.95■□□□□ 0.46
SNX6-202ENST00000396526 GNG11P61952 73 aa17.95■□□□□ 0.46
SNX6-202ENST00000396526 HERC4Q5GLZ8 1057 aaPredicted RBP17.95■□□□□ 0.46
SNX6-202ENST00000396526 REXO1L1PQ8IX06 675 aa17.95■□□□□ 0.46
SNX6-202ENST00000396526 LPAR1Q92633 364 aa17.95■□□□□ 0.46
SNX6-202ENST00000396526 ZHX3Q9H4I2 956 aa17.95■□□□□ 0.46
SNX6-202ENST00000396526 ZBED3Q96IU2 234 aaPredicted RBP17.95■□□□□ 0.46
SNX6-202ENST00000396526 POTEB3A0JP26 581 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 POTECB2RU33 542 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 CASQ1P31415 396 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 COASYQ13057 564 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 POTEBQ6S5H4 581 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 ETNPPLQ8TBG4 499 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 CRYGNQ8WXF5 182 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 ABHD10Q9NUJ1 306 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 PITPNM2Q9BZ72 1349 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 E9PMD0 336 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 KIF5CO60282 957 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 FXR1P51114 621 aaKnown RBP eCLIP17.94■□□□□ 0.46
SNX6-202ENST00000396526 MAP3K10Q02779 954 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 ARHGAP29Q52LW3 1261 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 KCNK18Q7Z418 384 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 CCDC84Q86UT8 332 aaPredicted RBP17.94■□□□□ 0.46
SNX6-202ENST00000396526 GJA10Q969M2 543 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 ERO1AQ96HE7 468 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 ZNF341Q9BYN7 854 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 DCAF15Q66K64 600 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 PRPF38AQ8NAV1 312 aaKnown RBP17.94■□□□□ 0.46
SNX6-202ENST00000396526 FBXO41Q8TF61 875 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 UIMC1Q96RL1 719 aa17.94■□□□□ 0.46
SNX6-202ENST00000396526 B4DLN1 442 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 FKBP3Q00688 224 aaKnown RBP17.93■□□□□ 0.46
SNX6-202ENST00000396526 MCF2L2Q86YR7 1114 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 PDCL3Q9H2J4 239 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 WDR46O15213 610 aaKnown RBP17.93■□□□□ 0.46
SNX6-202ENST00000396526 ZNF280AP59817 542 aaPredicted RBP17.93■□□□□ 0.46
SNX6-202ENST00000396526 LDHDQ86WU2 507 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 HPS3Q969F9 1004 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 SOWAHDA6NJG2 315 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 URI1O94763 535 aaPredicted RBP17.93■□□□□ 0.46
SNX6-202ENST00000396526 GNA14O95837 355 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 TOGARAM2Q6ZUX3 1019 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 KRT26Q7Z3Y9 468 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 MNS1Q8NEH6 495 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 SEMA6BQ9H3T3 888 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 CCPG1Q9ULG6 757 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 CD2APQ9Y5K6 639 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 GJA3Q9Y6H8 435 aa17.93■□□□□ 0.46
SNX6-202ENST00000396526 PSME4Q14997 1843 aa17.92■□□□□ 0.46
SNX6-202ENST00000396526 FAM86B1E9PN63 330 aa17.92■□□□□ 0.46
SNX6-202ENST00000396526 TRAF5O00463 557 aa17.92■□□□□ 0.46
SNX6-202ENST00000396526 MSH4O15457 936 aa17.92■□□□□ 0.46
SNX6-202ENST00000396526 FAM86B2P0C5J1 330 aa17.92■□□□□ 0.46
SNX6-202ENST00000396526 STAT3P40763 770 aa17.92■□□□□ 0.46
SNX6-202ENST00000396526 MAN2A1Q16706 1144 aa17.92■□□□□ 0.46
SNX6-202ENST00000396526 DNAJC19Q96DA6 116 aa17.92■□□□□ 0.46
SNX6-202ENST00000396526 CTNND1O60716 968 aaKnown RBP17.92■□□□□ 0.46
SNX6-202ENST00000396526 ZNF507Q8TCN5 953 aa17.92■□□□□ 0.46
SNX6-202ENST00000396526 POLR3CQ9BUI4 534 aaPredicted RBP17.92■□□□□ 0.46
SNX6-202ENST00000396526 WDR11Q9BZH6 1224 aa17.92■□□□□ 0.46
SNX6-202ENST00000396526 CAPN11Q9UMQ6 739 aa17.92■□□□□ 0.46
SNX6-202ENST00000396526 ADGRG1Q9Y653 693 aa17.92■□□□□ 0.46
SNX6-202ENST00000396526 SETQ01105 290 aaPredicted RBP17.91■□□□□ 0.46
SNX6-202ENST00000396526 ECM1Q16610 540 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 CCDC40Q4G0X9 1142 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 LRCH2Q5VUJ6 765 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 CATSPER3Q86XQ3 398 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 DESI2Q9BSY9 194 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 MYH7BA7E2Y1 1941 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 TBCAO75347 108 aaKnown RBP17.91■□□□□ 0.46
SNX6-202ENST00000396526 MED24O75448 989 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 USP14P54578 494 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 SLF1Q9BQI6 1058 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 TANGO6Q9C0B7 1094 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 POTEFA5A3E0 1075 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 GAS7O60861 476 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 POTEIP0CG38 1075 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 CYP11B2P19099 503 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 POTEGQ6S5H5 508 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 POTEEQ6S8J3 1075 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 EEF2KMTQ96G04 330 aa17.91■□□□□ 0.46
SNX6-202ENST00000396526 TTC26A0AVF1 554 aa17.9■□□□□ 0.46
SNX6-202ENST00000396526 FECHP22830 423 aa17.9■□□□□ 0.46
SNX6-202ENST00000396526 VWA3BQ502W6 1294 aa17.9■□□□□ 0.46
SNX6-202ENST00000396526 CEP55Q53EZ4 464 aa17.9■□□□□ 0.46
SNX6-202ENST00000396526 KIAA1755Q5JYT7 1200 aa17.9■□□□□ 0.46
SNX6-202ENST00000396526 PPP4R3CPQ6ZMV5 832 aa17.9■□□□□ 0.46
SNX6-202ENST00000396526 MICALL2Q8IY33 904 aa17.9■□□□□ 0.46
SNX6-202ENST00000396526 SYT2Q8N9I0 419 aaPredicted RBP17.9■□□□□ 0.46
SNX6-202ENST00000396526 CEP63Q96MT8 703 aa17.9■□□□□ 0.46
SNX6-202ENST00000396526 ERGIC2Q96RQ1 377 aa17.9■□□□□ 0.46
SNX6-202ENST00000396526 L2HGDHQ9H9P8 463 aa17.9■□□□□ 0.46
SNX6-202ENST00000396526 CNOT7Q9UIV1 285 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms