RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 GJA5P36382 358 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 FXR1P51114 621 aaKnown RBP eCLIP11.46□□□□□ -0.57
TUBB-208ENST00000396389 ZNF157P51786 506 aaPredicted RBP11.46□□□□□ -0.57
TUBB-208ENST00000396389 BRAPQ7Z569 592 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 FAM71BQ8TC56 605 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 COA7Q96BR5 231 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 EMILIN3Q9NT22 766 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 SH3BP1Q9Y3L3 701 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 PPP2R3BQ9Y5P8 575 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 ADAMTS3O15072 1205 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 VCAM1P19320 739 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 PLS1Q14651 629 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 NR1I3Q14994 352 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 CT47A1Q5JQC4 288 aaPredicted RBP11.46□□□□□ -0.57
TUBB-208ENST00000396389 TADA2BQ86TJ2 420 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 AFAP1L1Q8TED9 768 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 SLF1Q9BQI6 1058 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 RPAP3Q9H6T3 665 aaPredicted RBP11.46□□□□□ -0.57
TUBB-208ENST00000396389 SAMM50Q9Y512 469 aa11.46□□□□□ -0.57
TUBB-208ENST00000396389 PPFIA4O75335 1185 aa11.46□□□□□ -0.58
TUBB-208ENST00000396389 RPS6KA5O75582 802 aa11.46□□□□□ -0.58
TUBB-208ENST00000396389 CCT6AP40227 531 aaKnown RBP11.46□□□□□ -0.58
TUBB-208ENST00000396389 MNAT1P51948 309 aa11.46□□□□□ -0.58
TUBB-208ENST00000396389 MDM2Q00987 491 aaPredicted RBP11.46□□□□□ -0.58
TUBB-208ENST00000396389 RESP18Q5W5W9 173 aa11.46□□□□□ -0.58
TUBB-208ENST00000396389 STAMQ92783 540 aa11.46□□□□□ -0.58
TUBB-208ENST00000396389 TCP11L1Q9NUJ3 509 aa11.46□□□□□ -0.58
TUBB-208ENST00000396389 MYBL2P10244 700 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 BMP3P12645 472 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 GGCXP38435 758 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 AFMP43652 599 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 BACE1P56817 501 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 SSRP1Q08945 709 aaKnown RBP11.45□□□□□ -0.58
TUBB-208ENST00000396389 NTRK3Q16288 839 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 CYP4F22Q6NT55 531 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 TMTC3Q6ZXV5 915 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 PPFIBP1Q86W92 1011 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 EGFL6Q8IUX8 553 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 ADGRF4Q8IZF3 695 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 RASGRP4Q8TDF6 673 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 HOOK2Q96ED9 719 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 MAP3K14Q99558 947 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 NYAP2Q9P242 653 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 GUCA1BQ9UMX6 200 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 TMX2Q9Y320 296 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 CYP2C8P10632 490 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 KIF5BP33176 963 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 MAP3K10Q02779 954 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 ZNF543Q08ER8 600 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 POSTNQ15063 836 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 FAM212AQ96EL1 285 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 PAGR1Q9BTK6 254 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 VCPKMTQ9H867 229 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 GOPCQ9HD26 462 aa11.45□□□□□ -0.58
TUBB-208ENST00000396389 CD44P16070 742 aaKnown RBP11.44□□□□□ -0.58
TUBB-208ENST00000396389 CPLX2Q6PUV4 134 aaKnown RBP11.44□□□□□ -0.58
TUBB-208ENST00000396389 BRMS1Q9HCU9 246 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 ZNF112Q9UJU3 913 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 MYH15Q9Y2K3 1946 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 WDR19Q8NEZ3 1342 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 DDAH1O94760 285 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 TOMM70O94826 608 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 PRPF6O94906 941 aaKnown RBP11.44□□□□□ -0.58
TUBB-208ENST00000396389 ERVK-24P63145 666 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 GRM4Q14833 912 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 MMS22LQ6ZRQ5 1243 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 TRIM22Q8IYM9 498 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 MMS19Q96T76 1030 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 AFG3L2Q9Y4W6 797 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 LAMB1P07942 1786 aa11.44□□□□□ -0.58
TUBB-208ENST00000396389 BTBD18B2RXH4 712 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 ERLIN2O94905 339 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 WDR78Q5VTH9 848 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 TYW1BQ6NUM6 668 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 SAPCD2Q86UD0 394 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 SMC1BQ8NDV3 1235 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 SHISA4Q96DD7 197 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 CHP1Q99653 195 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 NAPGQ99747 312 aaPredicted RBP11.43□□□□□ -0.58
TUBB-208ENST00000396389 HOOK1Q9UJC3 728 aaKnown RBP11.43□□□□□ -0.58
TUBB-208ENST00000396389 HNRNPH1P31943 449 aaKnown RBP11.43□□□□□ -0.58
TUBB-208ENST00000396389 STAT2P52630 851 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 MCTP2Q6DN12 878 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 ATG4CQ96DT6 458 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 JMJD4Q9H9V9 463 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 TMOD4Q9NZQ9 345 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 MYO6Q9UM54 1294 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 FOCADQ5VW36 1801 aa11.43□□□□□ -0.58
TUBB-208ENST00000396389 CCDC196A0A1B0GTZ2 297 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 PALM3A6NDB9 673 aaPredicted RBP11.42□□□□□ -0.58
TUBB-208ENST00000396389 GYPCP04921 128 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 NR5A1Q13285 461 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 KCNV1Q6PIU1 500 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 APTXQ7Z2E3 356 aaKnown RBP11.42□□□□□ -0.58
TUBB-208ENST00000396389 ERO1BQ86YB8 467 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 EFCAB13Q8IY85 973 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 OXER1Q8TDS5 423 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 AGBL1Q96MI9 1066 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 VPS16Q9H269 839 aa11.42□□□□□ -0.58
TUBB-208ENST00000396389 R3HDMLQ9H3Y0 253 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms