RNA–Protein interactions for RNA: ENST00000395983.7

BDNF-206, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-206ENST00000395983 CCDC43Q96MW1 224 aaKnown RBP9.1□□□□□ -0.95
BDNF-206ENST00000395983 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.1□□□□□ -0.95
BDNF-206ENST00000395983 IL17RBQ9NRM6 502 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 TFR2Q9UP52 801 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 DOT1LQ8TEK3 1739 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 KIAA1551Q9HCM1 1747 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 NR1D1P20393 614 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 GUCY2DQ02846 1103 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 HLTFQ14527 1009 aaKnown RBP eCLIP9.1□□□□□ -0.95
BDNF-206ENST00000395983 SLC18A3Q16572 532 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 YTHDF3Q7Z739 585 aaKnown RBP9.1□□□□□ -0.95
BDNF-206ENST00000395983 SYCE1Q8N0S2 351 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 EPB41L5Q9HCM4 733 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 SLIT2O94813 1529 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 RASSF10A6NK89 507 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 CCDC188H7C350 402 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 GCOM1H8Y6P7 765 aaPredicted RBP9.1□□□□□ -0.95
BDNF-206ENST00000395983 ZNF263O14978 683 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 CETN3O15182 167 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 KRT18P05783 430 aaKnown RBP9.1□□□□□ -0.95
BDNF-206ENST00000395983 MYZAPP0CAP1 466 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 RDXP35241 583 aaKnown RBP9.1□□□□□ -0.95
BDNF-206ENST00000395983 MRPL12P52815 198 aaKnown RBP9.1□□□□□ -0.95
BDNF-206ENST00000395983 BIRC3Q13489 604 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 DYMQ7RTS9 669 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 CCDC26Q8TAB7 109 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 CALR3Q96L12 384 aaKnown RBP9.1□□□□□ -0.95
BDNF-206ENST00000395983 EPN3Q9H201 632 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 TFCP2L1Q9NZI6 479 aa9.1□□□□□ -0.95
BDNF-206ENST00000395983 MYMKA6NI61 221 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 BTNL10A8MVZ5 291 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 SMIM22K7EJ46 135 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 FLOT1O75955 427 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 GUCY2CP25092 1073 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 IRX3P78415 501 aaPredicted RBP9.09□□□□□ -0.95
BDNF-206ENST00000395983 SLC7A5Q01650 507 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 RAPGEF1Q13905 1077 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 FAM83BQ5T0W9 1011 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 KLHDC7AQ5VTJ3 777 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 PACS2Q86VP3 889 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 SMCR8Q8TEV9 937 aaPredicted RBP9.09□□□□□ -0.95
BDNF-206ENST00000395983 ZNF384Q8TF68 577 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 DDX12PQ92771 950 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 CELF1Q92879 486 aaKnown RBP9.09□□□□□ -0.95
BDNF-206ENST00000395983 ATP6V1G3Q96LB4 118 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 SPAG5Q96R06 1193 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 TACO1Q9BSH4 297 aaKnown RBP9.09□□□□□ -0.95
BDNF-206ENST00000395983 LSM14BQ9BX40 385 aaKnown RBP9.09□□□□□ -0.95
BDNF-206ENST00000395983 TLR10Q9BXR5 811 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 RBM12Q9NTZ6 932 aaKnown RBP9.09□□□□□ -0.95
BDNF-206ENST00000395983 ATP8B3O60423 1300 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 USP17L3A6NCW0 530 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 USP17L4A6NCW7 530 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 PLEKP08567 350 aaPredicted RBP9.09□□□□□ -0.95
BDNF-206ENST00000395983 VEGFAP15692 232 aaPredicted RBP9.09□□□□□ -0.95
BDNF-206ENST00000395983 LIG3P49916 1009 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 MNAT1P51948 309 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 GRB10Q13322 594 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 CDC37Q16543 378 aaPredicted RBP9.09□□□□□ -0.95
BDNF-206ENST00000395983 KIAA0753Q2KHM9 967 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 EMC10Q5UCC4 262 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 PPP4R3AQ6IN85 833 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 USP17L1Q7RTZ2 530 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 TGFBRAP1Q8WUH2 860 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 BAP1Q92560 729 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 EEF2KMTQ96G04 330 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 ZIM3Q96PE6 472 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 TAF1DQ9H5J8 278 aaPredicted RBP9.09□□□□□ -0.95
BDNF-206ENST00000395983 PANK4Q9NVE7 773 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 ANKIB1Q9P2G1 1089 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 PCDHGC5Q9Y5F6 944 aa9.09□□□□□ -0.95
BDNF-206ENST00000395983 MEFVO15553 781 aaPredicted RBP9.09□□□□□ -0.96
BDNF-206ENST00000395983 BUB1O43683 1085 aa9.09□□□□□ -0.96
BDNF-206ENST00000395983 CYTH3O43739 400 aa9.09□□□□□ -0.96
BDNF-206ENST00000395983 ZPR1O75312 459 aa9.09□□□□□ -0.96
BDNF-206ENST00000395983 CXCR5P32302 372 aa9.09□□□□□ -0.96
BDNF-206ENST00000395983 GFPT1Q06210 699 aaPredicted RBP9.09□□□□□ -0.96
BDNF-206ENST00000395983 PLCB4Q15147 1175 aa9.09□□□□□ -0.96
BDNF-206ENST00000395983 CROCCP2Q86T23 111 aa9.09□□□□□ -0.96
BDNF-206ENST00000395983 PSMB7Q99436 277 aa9.09□□□□□ -0.96
BDNF-206ENST00000395983 NLRC4Q9NPP4 1024 aa9.09□□□□□ -0.96
BDNF-206ENST00000395983 BIN2Q9UBW5 565 aaPredicted RBP9.09□□□□□ -0.96
BDNF-206ENST00000395983 MYH10P35580 1976 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 PALMO75781 387 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 PPP1R37O75864 691 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 RASA1P20936 1047 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 SLC1A4P43007 532 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 POLR2FP61218 127 aaKnown RBP9.08□□□□□ -0.96
BDNF-206ENST00000395983 C16orf86Q6ZW13 317 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 CCDC50Q8IVM0 306 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 ERMNQ8TAM6 284 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 DYNLL2Q96FJ2 89 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 CABS1Q96KC9 395 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 MTMR9Q96QG7 549 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 NAP1L3Q99457 506 aaPredicted RBP9.08□□□□□ -0.96
BDNF-206ENST00000395983 PAGR1Q9BTK6 254 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 PLEKHA4Q9H4M7 779 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 ACTR5Q9H9F9 607 aaPredicted RBP9.08□□□□□ -0.96
BDNF-206ENST00000395983 SWAP70Q9UH65 585 aa9.08□□□□□ -0.96
BDNF-206ENST00000395983 NFU1Q9UMS0 254 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms