RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 RNF135Q8IUD6 432 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 LGR6Q9HBX8 967 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 TMEM232C9JQI7 657 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 ACSL3O95573 720 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 MCF2P10911 925 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 HSPA2P54652 639 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 RBL2Q08999 1139 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 GOLGA5Q8TBA6 731 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 TMEM63CQ9P1W3 806 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 ODR4Q5SWX8 454 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 SPATS2Q86XZ4 545 aaKnown RBP13.25□□□□□ -0.29
SIN3A-202ENST00000394947 SPATS2LQ9NUQ6 558 aaKnown RBP13.25□□□□□ -0.29
SIN3A-202ENST00000394947 GABPB1Q06547 395 aaPredicted RBP13.25□□□□□ -0.29
SIN3A-202ENST00000394947 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
SIN3A-202ENST00000394947 CADPS2Q86UW7 1296 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 UBE2TQ9NPD8 197 aaPredicted RBP13.25□□□□□ -0.29
SIN3A-202ENST00000394947 A0A0G2JND7 137 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 PLEKHG3A1L390 1219 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 VAMP4O75379 141 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 MT-ND3P03897 115 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 PSMC1P62191 440 aaKnown RBP13.25□□□□□ -0.29
SIN3A-202ENST00000394947 ZSCAN10Q96SZ4 725 aaPredicted RBP13.25□□□□□ -0.29
SIN3A-202ENST00000394947 SLC7A5P2Q9GIP4 190 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 NFKBIL1Q9UBC1 381 aaPredicted RBP13.25□□□□□ -0.29
SIN3A-202ENST00000394947 MCF2LO15068 1137 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 SUPT3HO75486 399 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 VCAM1P19320 739 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 MDH1BQ5I0G3 518 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 HEXIM2Q96MH2 286 aaKnown RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 CDCA7Q9BWT1 371 aaPredicted RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 ADD1P35611 737 aaKnown RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 CCDC84Q86UT8 332 aaPredicted RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 ATP6V0A1Q93050 837 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 TTC17Q96AE7 1141 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 NUDCD1Q96RS6 583 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 DRC3Q9H069 523 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 GTSE1Q9NYZ3 720 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 AFPP02771 609 aaKnown RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 SRGAP2CP0DJJ0 459 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 LRRC23Q53EV4 343 aaPredicted RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 METTL23Q86XA0 190 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 FBXO11Q86XK2 927 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 SCOCQ9UIL1 159 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 TOM1O60784 492 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 PYGLP06737 847 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 LRRC8AQ8IWT6 810 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 ABHD8Q96I13 439 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 EYA1Q99502 592 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 NT5C3AQ9H0P0 336 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 THEGQ9P2T0 379 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 NOVA2Q9UNW9 492 aaKnown RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 RRP15Q9Y3B9 282 aaKnown RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 MXD4Q14582 209 aaPredicted RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 ZNF394Q53GI3 561 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 HS1BP3Q53T59 392 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 PPP1R13BQ96KQ4 1090 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 PTK2Q05397 1052 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 LBRQ14739 615 aaKnown RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 SYCP2LQ5T4T6 812 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 ATL3Q6DD88 541 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 PASD1Q8IV76 773 aa13.24□□□□□ -0.29
SIN3A-202ENST00000394947 TDRD7Q8NHU6 1098 aaKnown RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 ENOX1Q8TC92 643 aaKnown RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 EIF2AQ9BY44 585 aaKnown RBP13.24□□□□□ -0.29
SIN3A-202ENST00000394947 CFAP69A5D8W1 941 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 MYO1FO00160 1098 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 CTNND1O60716 968 aaKnown RBP13.23□□□□□ -0.29
SIN3A-202ENST00000394947 PTPREP23469 700 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 KDELC2Q7Z4H8 507 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 ARHGAP45Q92619 1136 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 SYTL2Q9HCH5 934 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 LARSQ9P2J5 1176 aaKnown RBP13.23□□□□□ -0.29
SIN3A-202ENST00000394947 PCDH11XQ9BZA7 1347 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 PCDH11YQ9BZA8 1340 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 GDF11O95390 407 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 RBBP7Q16576 425 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 BBS9Q3SYG4 887 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 ZNF668Q96K58 619 aaPredicted RBP13.23□□□□□ -0.29
SIN3A-202ENST00000394947 MED4Q9NPJ6 270 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 TADA3O75528 432 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 TBC1D1Q86TI0 1168 aaPredicted RBP13.23□□□□□ -0.29
SIN3A-202ENST00000394947 METTL22Q9BUU2 404 aaPredicted RBP13.23□□□□□ -0.29
SIN3A-202ENST00000394947 PYCARDQ9ULZ3 195 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 STK24Q9Y6E0 443 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 IL16Q14005 1332 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 A6NNZ2 444 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 SERPINI2O75830 405 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 TUBB8Q3ZCM7 444 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 SPTLC3Q9NUV7 552 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 SOWAHDA6NJG2 315 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 SFI1A8K8P3 1242 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 PRPF4O43172 522 aaKnown RBP eCLIP13.23□□□□□ -0.298e-9■■■■■ 31.8
SIN3A-202ENST00000394947 HSP90AA5PQ58FG0 334 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 ATXN7L3BQ96GX2 97 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 TTC25Q96NG3 672 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 ZNF577Q9BSK1 485 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 FAM167BQ9BTA0 163 aa13.23□□□□□ -0.29
SIN3A-202ENST00000394947 ESRRAP11474 423 aaPredicted RBP13.22□□□□□ -0.29
SIN3A-202ENST00000394947 CDC25AP30304 524 aa13.22□□□□□ -0.29
SIN3A-202ENST00000394947 TSPY1Q01534 308 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms