RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 FAM198AQ9UFP1 575 aa14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 RGPD3A6NKT7 1758 aaPredicted RBP14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 RGPD4Q7Z3J3 1758 aa14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 BICDL2A1A5D9 508 aa14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 MYL1P05976 194 aa14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 TNNT3P45378 269 aaPredicted RBP14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 ADCY7P51828 1080 aa14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 VWA3BQ502W6 1294 aa14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 ADGRF4Q8IZF3 695 aa14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 HAS1Q92839 578 aa14.98□□□□□ -0.01
GTF2F1-201ENST00000394456 EIF3CLB5ME19 914 aaKnown RBP14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 CYLC1P35663 651 aaPredicted RBP14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 MATR3P43243 847 aaKnown RBP eCLIP14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 LRRC55Q6ZSA7 311 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 DNAAF5Q86Y56 855 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 NELFCDQ8IXH7 590 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 CAGE1Q8TC20 777 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 C7orf43Q8WVR3 580 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 RAD54LQ92698 747 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 CCDC42Q96M95 316 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 ERGIC2Q96RQ1 377 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 EIF3CQ99613 913 aaKnown RBP14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 CRACR2AQ9BSW2 395 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 CUEDC2Q9H467 287 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 BCAS3Q9H6U6 928 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 NLRC4Q9NPP4 1024 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 ZNHIT6Q9NWK9 470 aaKnown RBP14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 GREB1LQ9C091 1923 aaPredicted RBP14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 USP17L15C9J2P7 530 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 USP17L13C9JLJ4 530 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 USP17L11C9JVI0 530 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 USP17L18D6R9N7 530 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 USP17L22D6RA61 530 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 USP17L17D6RBQ6 530 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 USP17L19D6RCP7 530 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 USP17L20D6RJB6 530 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 STAT3P40763 770 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 DNA2P51530 1060 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 KRT83P78385 493 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 USP17L24Q0WX57 530 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 ENOX2Q16206 610 aaKnown RBP14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 ASPRV1Q53RT3 343 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 CNNM4Q6P4Q7 775 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 NFRKBQ6P4R8 1299 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 USP17L6PQ6QN14 398 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 SH3BP5LQ7L8J4 393 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 CDK5RAP3Q96JB5 506 aa14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 TDRD3Q9H7E2 651 aaKnown RBP14.97□□□□□ -0.01
GTF2F1-201ENST00000394456 CCDC66A2RUB6 948 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 E9PMD0 336 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 PPIP5K2O43314 1243 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 KRT86O43790 486 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 ERLIN1O75477 346 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 SNHG28P0DPA3 235 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 GFPT1Q06210 699 aaPredicted RBP14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 NOC3LQ8WTT2 800 aaKnown RBP14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 LCMT1Q9UIC8 334 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 FAM170AA1A519 330 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 YDJCA8MPS7 323 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 KIF11P52732 1056 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 SLC7A5Q01650 507 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 ZNF543Q08ER8 600 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 UNC13DQ70J99 1090 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 CCDC47Q96A33 483 aaKnown RBP14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 PURBQ96QR8 312 aaKnown RBP14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 PCDHA13Q9Y5I0 950 aa14.96□□□□□ -0.01
GTF2F1-201ENST00000394456 POTEB2H3BUK9 544 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 BUB1O43683 1085 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 VAV2P52735 878 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 FAM193AP78312 1265 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 KCNMA1Q12791 1236 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 TUBB2AQ13885 445 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 SECISBP2LQ93073 1101 aaKnown RBP14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 TUBB2BQ9BVA1 445 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 IFIH1Q9BYX4 1025 aaKnown RBP14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 TANGO6Q9C0B7 1094 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 GDF11O95390 407 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 SMARCA1P28370 1054 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 DEFB132Q7Z7B7 95 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 BAP1Q92560 729 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 DNAJC19Q96DA6 116 aa14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 P2RX7Q99572 595 aaKnown RBP14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 ZC3H4Q9UPT8 1303 aaKnown RBP14.95□□□□□ -0.02
GTF2F1-201ENST00000394456 CAPN2P17655 700 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 FXR2P51116 673 aaKnown RBP eCLIP14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 AMPD3Q01432 767 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 KIF5AQ12840 1032 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 SLC30A10Q6XR72 485 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 NUP58Q9BVL2 599 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 DDX25Q9UHL0 483 aaKnown RBP14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 DMGDHQ9UI17 866 aaKnown RBP14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 PLAGL2Q9UPG8 496 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 MYO3BQ8WXR4 1341 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 SYF2O95926 243 aaKnown RBP14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 SLC1A4P43007 532 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 ARID5AQ03989 594 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 COASYQ13057 564 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 ZSCAN26Q16670 478 aa14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 CERKLQ49MI3 558 aaPredicted RBP14.94□□□□□ -0.02
GTF2F1-201ENST00000394456 WDR93Q6P2C0 686 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms