RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 DDX12PQ92771 950 aa8□□□□□ -1.13
SMAD1-202ENST00000394092 KIF12Q96FN5 646 aa8□□□□□ -1.13
SMAD1-202ENST00000394092 MBOAT7Q96N66 472 aa8□□□□□ -1.13
SMAD1-202ENST00000394092 TTYH3Q9C0H2 523 aa8□□□□□ -1.13
SMAD1-202ENST00000394092 SLC39A2Q9NP94 309 aa8□□□□□ -1.13
SMAD1-202ENST00000394092 KCNMB3Q9NPA1 279 aa8□□□□□ -1.13
SMAD1-202ENST00000394092 CDC23Q9UJX2 597 aa8□□□□□ -1.13
SMAD1-202ENST00000394092 HDAC9Q9UKV0 1011 aa8□□□□□ -1.13
SMAD1-202ENST00000394092 EPN1Q9Y6I3 576 aaPredicted RBP8□□□□□ -1.13
SMAD1-202ENST00000394092 F5H6K3 240 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 FANCGO15287 622 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 ATP8B1O43520 1251 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 KRT86O43790 486 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 GNA14O95837 355 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 BMP3P12645 472 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 CACNB3P54284 484 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 CBX1P83916 185 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 ARHGAP4P98171 946 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 KLRC3Q07444 240 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 EHHADHQ08426 723 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 COASYQ13057 564 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 AOC3Q16853 763 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 Q4G0T1 1027 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 VWA3BQ502W6 1294 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 FAM26FQ5R3K3 315 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 TEX35Q5T0J7 233 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 DYMQ7RTS9 669 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 SRGAP1Q7Z6B7 1085 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 KIAA1328Q86T90 577 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 SPNS2Q8IVW8 549 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 ZFPM1Q8IX07 1006 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 ACRBPQ8NEB7 543 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 HAS1Q92839 578 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 SLF1Q9BQI6 1058 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 TSGA10Q9BZW7 698 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 EHMT1Q9H9B1 1298 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 ARHGEF10LQ9HCE6 1279 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 PANK4Q9NVE7 773 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 COLQQ9Y215 455 aaPredicted RBP7.99□□□□□ -1.13
SMAD1-202ENST00000394092 PITPNM2Q9BZ72 1349 aa7.99□□□□□ -1.13
SMAD1-202ENST00000394092 SPDYE4A6NLX3 237 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 EIF3CLB5ME19 914 aaKnown RBP7.98□□□□□ -1.13
SMAD1-202ENST00000394092 PPIP5K2O43314 1243 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 EDIL3O43854 480 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 NDUFB10O96000 172 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 TUBBP07437 444 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 SREBF1P36956 1147 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 MMP14P50281 582 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 CHMP4BP1P59074 171 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 FKBP3Q00688 224 aaKnown RBP7.98□□□□□ -1.13
SMAD1-202ENST00000394092 MIIPQ5JXC2 388 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 BTNL9Q6UXG8 535 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 RSRC2Q7L4I2 434 aaKnown RBP7.98□□□□□ -1.13
SMAD1-202ENST00000394092 SLC35F6Q8N357 371 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 FAM20AQ96MK3 541 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 CEP63Q96MT8 703 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 CSRNP1Q96S65 589 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 EIF3CQ99613 913 aaKnown RBP7.98□□□□□ -1.13
SMAD1-202ENST00000394092 EDEM3Q9BZQ6 932 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 NUCKS1Q9H1E3 243 aaKnown RBP7.98□□□□□ -1.13
SMAD1-202ENST00000394092 NDST4Q9H3R1 872 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 SEMA6BQ9H3T3 888 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 SH2D4AQ9H788 454 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 GOPCQ9HD26 462 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 STK32BQ9NY57 414 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 RBBP6Q7Z6E9 1792 aaKnown RBP7.98□□□□□ -1.13
SMAD1-202ENST00000394092 FAM196BA6NMK8 535 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 USP17L15C9J2P7 530 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 USP17L13C9JLJ4 530 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 USP17L11C9JVI0 530 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 USP17L18D6R9N7 530 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 USP17L22D6RA61 530 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 USP17L17D6RBQ6 530 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 USP17L19D6RCP7 530 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 USP17L20D6RJB6 530 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 GDF11O95390 407 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 SSBP05455 408 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMAD1-202ENST00000394092 KRT18P05783 430 aaKnown RBP7.98□□□□□ -1.13
SMAD1-202ENST00000394092 PLA2G4BP0C869 781 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 TIE1P35590 1138 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 GABPB1Q06547 395 aaPredicted RBP7.98□□□□□ -1.13
SMAD1-202ENST00000394092 USP17L24Q0WX57 530 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 SPA17Q15506 151 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 USP17L6PQ6QN14 398 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 SH3BP5LQ7L8J4 393 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 GPBP1Q86WP2 473 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 LRRN4CLQ8ND94 238 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 C7orf43Q8WVR3 580 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 DNAJC19Q96DA6 116 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 TDRD3Q9H7E2 651 aaKnown RBP7.98□□□□□ -1.13
SMAD1-202ENST00000394092 TRPC6Q9Y210 931 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 COL4A3BPQ9Y5P4 624 aa7.98□□□□□ -1.13
SMAD1-202ENST00000394092 ANO9A1A5B4 782 aa7.97□□□□□ -1.13
SMAD1-202ENST00000394092 CTAGE15A4D2H0 777 aa7.97□□□□□ -1.13
SMAD1-202ENST00000394092 RNF225M0QZC1 329 aaPredicted RBP7.97□□□□□ -1.13
SMAD1-202ENST00000394092 PIK3CDO00329 1044 aa7.97□□□□□ -1.13
SMAD1-202ENST00000394092 PSMD14O00487 310 aa7.97□□□□□ -1.13
SMAD1-202ENST00000394092 MEIS2O14770 477 aa7.97□□□□□ -1.13
SMAD1-202ENST00000394092 USO1O60763 962 aaKnown RBP7.97□□□□□ -1.13
SMAD1-202ENST00000394092 ERLIN1O75477 346 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms