RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 Q9Y3F1 56 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 GTF3C3Q9Y5Q9 886 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 ELP1O95163 1332 aa8.8□□□□□ -1
HMGB3P1-201ENST00000393368 A6NJR5 290 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 ARVCFO00192 962 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 CPLX1O14810 134 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 NKRFO15226 690 aaKnown RBP eCLIP8.79□□□□□ -1
HMGB3P1-201ENST00000393368 ZEB2O60315 1214 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 ZNF286BP0CG31 522 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 ITGB5P18084 799 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 CDK7P50613 346 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 AKAP17AQ02040 695 aaKnown RBP8.79□□□□□ -1
HMGB3P1-201ENST00000393368 SSRP1Q08945 709 aaKnown RBP8.79□□□□□ -1
HMGB3P1-201ENST00000393368 ITGA7Q13683 1181 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 ME3Q16798 604 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 HSDL1Q3SXM5 330 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 FAM47CQ5HY64 1035 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 HABP4Q5JVS0 413 aaKnown RBP8.79□□□□□ -1
HMGB3P1-201ENST00000393368 MYSM1Q5VVJ2 828 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 ANKRD33Q7Z3H0 272 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 FAM126BQ8IXS8 530 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 DHX37Q8IY37 1157 aaKnown RBP8.79□□□□□ -1
HMGB3P1-201ENST00000393368 CYP2W1Q8TAV3 490 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 BADQ92934 168 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 IL17RAQ96F46 866 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 INPP4AQ96PE3 977 aaPredicted RBP8.79□□□□□ -1
HMGB3P1-201ENST00000393368 KIF2CQ99661 725 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 GDF15Q99988 308 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 MTG1Q9BT17 334 aaPredicted RBP8.79□□□□□ -1
HMGB3P1-201ENST00000393368 RNF26Q9BY78 433 aaPredicted RBP8.79□□□□□ -1
HMGB3P1-201ENST00000393368 ANO3Q9BYT9 981 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 SLKQ9H2G2 1235 aaPredicted RBP8.79□□□□□ -1
HMGB3P1-201ENST00000393368 PRO3102Q9H379 93 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 TMEM39AQ9NV64 488 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 POLR3EQ9NVU0 708 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 PRKAG2Q9UGJ0 569 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 UMODL1Q5DID0 1318 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 LAMA3Q16787 3333 aa8.79□□□□□ -1
HMGB3P1-201ENST00000393368 SPATA31C2B4DYI2 1134 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 hCG_1984214I3L0E3 225 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 B4GALT4O60513 344 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 PFKFB2O60825 505 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 ATP9AO75110 1047 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 CTDNEP1O95476 244 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 CLK2P49760 499 aaKnown RBP8.78□□□□□ -1
HMGB3P1-201ENST00000393368 FOSBP53539 338 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 ST3GAL1Q11201 340 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 NBPF20Q3BBV1 942 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 GNPTABQ3T906 1256 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 CELF3Q5SZQ8 465 aaKnown RBP8.78□□□□□ -1
HMGB3P1-201ENST00000393368 CYFIP1Q7L576 1253 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 ZNF713Q8N859 430 aaPredicted RBP8.78□□□□□ -1
HMGB3P1-201ENST00000393368 SLC43A3Q8NBI5 491 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 SP7Q8TDD2 431 aaPredicted RBP8.78□□□□□ -1
HMGB3P1-201ENST00000393368 KAT2BQ92831 832 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 SPATA33Q96N06 139 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 C22orf23Q9BZE7 217 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 PPP1R12CQ9BZL4 782 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 UBE2OQ9C0C9 1292 aaKnown RBP8.78□□□□□ -1
HMGB3P1-201ENST00000393368 MLXIPQ9HAP2 919 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 GJB4Q9NTQ9 266 aa8.78□□□□□ -1
HMGB3P1-201ENST00000393368 TRMT13Q9NUP7 481 aaKnown RBP8.78□□□□□ -1
HMGB3P1-201ENST00000393368 DCDC2CA8MYV0 355 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 KIAA0355O15063 1070 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 FIBPO43427 364 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 JAK2O60674 1132 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 CABYRO75952 493 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 DEXIO95424 95 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 CD4P01730 458 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 CYP2C9P11712 490 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 ICAM3P32942 547 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 EPHB4P54760 987 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 MTMR1Q13613 665 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 LAMC2Q13753 1193 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 BRDTQ58F21 947 aaPredicted RBP8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 TRIM50Q86XT4 487 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 TRIM22Q8IYM9 498 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 REXO1Q8N1G1 1221 aaKnown RBP8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 PPTC7Q8NI37 304 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 EMID1Q96A84 441 aaPredicted RBP8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 TOX2Q96NM4 488 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 LBHD1Q9BQE6 289 aaPredicted RBP8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 ALG1Q9BT22 464 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 ZMYND12Q9H0C1 365 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 ALDH8A1Q9H2A2 487 aaPredicted RBP8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 C6orf50Q9HD87 102 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 TBX21Q9UL17 535 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 KCNJ14Q9UNX9 436 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 UBIAD1Q9Y5Z9 338 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 LTBP2Q14767 1821 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 SZT2Q5T011 3432 aa8.77□□□□□ -1.01
HMGB3P1-201ENST00000393368 ESYT2A0FGR8 921 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 C19orf67A6NJJ6 358 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 FAM86B1E9PN63 330 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 NOP56O00567 594 aaKnown RBP8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 SOX1O00570 391 aaPredicted RBP8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 TLR3O15455 904 aaKnown RBP8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 EIF5BO60841 1220 aaKnown RBP8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 STAM2O75886 525 aa8.76□□□□□ -1.01
HMGB3P1-201ENST00000393368 FAM86B2P0C5J1 330 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms