RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 KIF11P52732 1056 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 GPS2Q13227 327 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 ZFPM1Q8IX07 1006 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 BAP1Q92560 729 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 MKL1Q969V6 931 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 COL4A3BPQ9Y5P4 624 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 DUSP10Q9Y6W6 482 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 MACROD2A1Z1Q3 448 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 LRRC53A6NM62 1247 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 USP17L15C9J2P7 530 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 USP17L13C9JLJ4 530 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 USP17L11C9JVI0 530 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 USP17L18D6R9N7 530 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 USP17L22D6RA61 530 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 USP17L17D6RBQ6 530 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 USP17L19D6RCP7 530 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 USP17L20D6RJB6 530 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 EIF3JO75822 258 aaKnown RBP13.64□□□□□ -0.23
RFC5-201ENST00000392542 TRIM37O94972 964 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 USP11P51784 963 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 FKBP3Q00688 224 aaKnown RBP13.64□□□□□ -0.23
RFC5-201ENST00000392542 USP17L24Q0WX57 530 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 USP17L6PQ6QN14 398 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 NEK11Q8NG66 645 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 CAPZA3Q96KX2 299 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 ZDHHC15Q96MV8 337 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 MBOAT7Q96N66 472 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 ANO3Q9BYT9 981 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 KCNMB3Q9NPA1 279 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 NYAP2Q9P242 653 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 PCDHA13Q9Y5I0 950 aa13.64□□□□□ -0.23
RFC5-201ENST00000392542 CYP3A7-CYP3A51PA0A087WV96 503 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 CCDC66A2RUB6 948 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 E9PMD0 336 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 SSBP05455 408 aaKnown RBP eCLIP13.63□□□□□ -0.23
RFC5-201ENST00000392542 PLA2G4BP0C869 781 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 EEF2P13639 858 aaKnown RBP13.63□□□□□ -0.23
RFC5-201ENST00000392542 CYP3A7P24462 503 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 CDC37Q16543 378 aaPredicted RBP13.63□□□□□ -0.23
RFC5-201ENST00000392542 SLFN13Q68D06 897 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 PDXDC1Q6P996 788 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 RRAGAQ7L523 313 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 CCDC65Q8IXS2 484 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 TRIM58Q8NG06 486 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 CEP63Q96MT8 703 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 IFIH1Q9BYX4 1025 aaKnown RBP13.63□□□□□ -0.23
RFC5-201ENST00000392542 DHX36Q9H2U1 1008 aaKnown RBP13.63□□□□□ -0.23
RFC5-201ENST00000392542 DEF6Q9H4E7 631 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 SH2D4AQ9H788 454 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 SUGCTQ9HAC7 445 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 PDE11AQ9HCR9 933 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 KIAA1024Q9UPX6 916 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 PCDHA1Q9Y5I3 950 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 ERICH4A6NGS2 130 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 TRAF5O00463 557 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 TACC1O75410 805 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 MCM3P25205 808 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 SLC1A4P43007 532 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 CASP8Q14790 479 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 CCDC40Q4G0X9 1142 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 MOXD1Q6UVY6 613 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 ARHGAP27Q6ZUM4 889 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 TANGO6Q9C0B7 1094 aa13.63□□□□□ -0.23
RFC5-201ENST00000392542 TMX4Q9H1E5 349 aaPredicted RBP13.63□□□□□ -0.23
RFC5-201ENST00000392542 POTEB3A0JP26 581 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 TARSL2A2RTX5 802 aaKnown RBP13.62□□□□□ -0.23
RFC5-201ENST00000392542 POTECB2RU33 542 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 AKR1B10O60218 316 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 KCNMA1Q12791 1236 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 AP3B2Q13367 1082 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 CERKLQ49MI3 558 aaPredicted RBP13.62□□□□□ -0.23
RFC5-201ENST00000392542 POTEBQ6S5H4 581 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 PODNQ7Z5L7 613 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 GPBP1Q86WP2 473 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 CAGE1Q8TC20 777 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 KANSL2Q9H9L4 492 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 JRKLQ9Y4A0 524 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 PCDHA2Q9Y5H9 948 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 BRWD3Q6RI45 1802 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 FAM196BA6NMK8 535 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 RAD21O60216 631 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 GNA14O95837 355 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 HMGB2P26583 209 aaKnown RBP13.62□□□□□ -0.23
RFC5-201ENST00000392542 PDE6BP35913 854 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 MAPK8IP2Q13387 824 aaPredicted RBP13.62□□□□□ -0.23
RFC5-201ENST00000392542 CACNA2D4Q7Z3S7 1137 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 MRIQ9BWK5 157 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 FGFBP2Q9BYJ0 223 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 JADE2Q9NQC1 790 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 CAPN6Q9Y6Q1 641 aa13.62□□□□□ -0.23
RFC5-201ENST00000392542 DDTLA6NHG4 134 aaPredicted RBP13.61□□□□□ -0.23
RFC5-201ENST00000392542 PJA2O43164 708 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 CYP11B2P19099 503 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 CACNB3P54284 484 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 MARSP56192 900 aaKnown RBP13.61□□□□□ -0.23
RFC5-201ENST00000392542 TCP10Q12799 353 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 SHROOM1Q2M3G4 852 aaPredicted RBP13.61□□□□□ -0.23
RFC5-201ENST00000392542 TAF3Q5VWG9 929 aa13.61□□□□□ -0.23
RFC5-201ENST00000392542 SLFN12Q8IYM2 578 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms