RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 IRF2BPLQ9H1B7 796 aa8.79□□□□□ -1
SNORA40.4-201ENST00000390971 SMOC1Q9H4F8 434 aa8.79□□□□□ -1
SNORA40.4-201ENST00000390971 SLC6A20Q9NP91 592 aa8.79□□□□□ -1
SNORA40.4-201ENST00000390971 PPARGC1AQ9UBK2 798 aaKnown RBP8.79□□□□□ -1
SNORA40.4-201ENST00000390971 PTCH2Q9Y6C5 1203 aa8.79□□□□□ -1
SNORA40.4-201ENST00000390971 EFCAB14O75071 495 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 SOD2P04179 222 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 APPP05067 770 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 CACNB2Q08289 660 aaPredicted RBP8.78□□□□□ -1
SNORA40.4-201ENST00000390971 SPIRE1Q08AE8 756 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 PAK1Q13153 545 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 KRTAP19-4Q3LI73 84 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 CYP4F22Q6NT55 531 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 B3GNT8Q7Z7M8 397 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 MTDHQ86UE4 582 aaKnown RBP8.78□□□□□ -1
SNORA40.4-201ENST00000390971 PHOSPHO1Q8TCT1 267 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 PANK1Q8TE04 598 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 KCNJ15Q99712 375 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 EPB41L4AQ9HCS5 686 aaPredicted RBP8.78□□□□□ -1
SNORA40.4-201ENST00000390971 USP35Q9P2H5 1018 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 NUB1Q9Y5A7 615 aa8.78□□□□□ -1
SNORA40.4-201ENST00000390971 JAG1P78504 1218 aa8.77□□□□□ -1.01
SNORA40.4-201ENST00000390971 GUCY1A3Q02108 690 aa8.77□□□□□ -1.01
SNORA40.4-201ENST00000390971 ETV3LQ6ZN32 361 aa8.77□□□□□ -1.01
SNORA40.4-201ENST00000390971 OTOP3Q7RTS5 596 aa8.77□□□□□ -1.01
SNORA40.4-201ENST00000390971 MIB1Q86YT6 1006 aa8.77□□□□□ -1.01
SNORA40.4-201ENST00000390971 PCDH18Q9HCL0 1135 aa8.77□□□□□ -1.01
SNORA40.4-201ENST00000390971 NGRNQ9NPE2 291 aaKnown RBP8.77□□□□□ -1.01
SNORA40.4-201ENST00000390971 PCDHB4Q9Y5E5 795 aa8.77□□□□□ -1.01
SNORA40.4-201ENST00000390971 GNAT1P11488 350 aa8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 LIMS1P48059 325 aa8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 C1QL4Q86Z23 238 aa8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 SIAH1Q8IUQ4 282 aa8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 TRIM48Q8IWZ4 208 aa8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 PIP4K2CQ8TBX8 421 aa8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 DACT3Q96B18 629 aaPredicted RBP8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 PWWP2AQ96N64 755 aa8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 YIPF4Q9BSR8 244 aa8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 MRPL4Q9BYD3 311 aaKnown RBP8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 PIF1Q9H611 641 aa8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 IPPKQ9H8X2 491 aa8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 PCDHA8Q9Y5H6 950 aa8.76□□□□□ -1.01
SNORA40.4-201ENST00000390971 TCRBV5S2A0A599 114 aa8.75□□□□□ -1.01
SNORA40.4-201ENST00000390971 MC3RP41968 323 aa8.75□□□□□ -1.01
SNORA40.4-201ENST00000390971 FZD5Q13467 585 aa8.75□□□□□ -1.01
SNORA40.4-201ENST00000390971 TRIM61Q5EBN2 209 aa8.75□□□□□ -1.01
SNORA40.4-201ENST00000390971 TCERG1LQ5VWI1 586 aa8.75□□□□□ -1.01
SNORA40.4-201ENST00000390971 ZC3H18Q86VM9 953 aaKnown RBP8.75□□□□□ -1.01
SNORA40.4-201ENST00000390971 FAM126BQ8IXS8 530 aa8.75□□□□□ -1.01
SNORA40.4-201ENST00000390971 SH3TC2Q8TF17 1288 aa8.75□□□□□ -1.01
SNORA40.4-201ENST00000390971 DDX11Q96FC9 970 aa8.75□□□□□ -1.01
SNORA40.4-201ENST00000390971 MYOTQ9UBF9 498 aa8.75□□□□□ -1.01
SNORA40.4-201ENST00000390971 NDOR1Q9UHB4 597 aa8.75□□□□□ -1.01
SNORA40.4-201ENST00000390971 WNT9AO14904 365 aa8.74□□□□□ -1.01
SNORA40.4-201ENST00000390971 CRTAMO95727 393 aa8.74□□□□□ -1.01
SNORA40.4-201ENST00000390971 COL6A2P12110 1019 aa8.74□□□□□ -1.01
SNORA40.4-201ENST00000390971 AFF3P51826 1226 aaKnown RBP8.74□□□□□ -1.01
SNORA40.4-201ENST00000390971 GSTCDQ8NEC7 633 aa8.74□□□□□ -1.01
SNORA40.4-201ENST00000390971 SMARCC2Q8TAQ2 1214 aa8.74□□□□□ -1.01
SNORA40.4-201ENST00000390971 MAGEB10Q96LZ2 347 aaPredicted RBP8.74□□□□□ -1.01
SNORA40.4-201ENST00000390971 PCDHA9Q9Y5H5 950 aa8.74□□□□□ -1.01
SNORA40.4-201ENST00000390971 ARVCFO00192 962 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 GSTA4O15217 222 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 KCNQ2O43526 872 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 ZSCAN22P10073 491 aaPredicted RBP8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 CYP2C8P10632 490 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 RANGAP1P46060 587 aaPredicted RBP8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 CAP1Q01518 475 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 SQSTM1Q13501 440 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 CD300LDQ6UXZ3 194 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 ARRDC4Q8NCT1 418 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 PCDH19Q8TAB3 1148 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 FBXW5Q969U6 566 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 SLC52A2Q9HAB3 445 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 ASH2LQ9UBL3 628 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 PMF1-BGLAPU3KQ54 211 aa8.73□□□□□ -1.01
SNORA40.4-201ENST00000390971 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.72□□□□□ -1.01
SNORA40.4-201ENST00000390971 PLD2O14939 933 aa8.72□□□□□ -1.01
SNORA40.4-201ENST00000390971 NKX3-2P78367 333 aa8.72□□□□□ -1.01
SNORA40.4-201ENST00000390971 HABP4Q5JVS0 413 aaKnown RBP8.72□□□□□ -1.01
SNORA40.4-201ENST00000390971 C16orf59Q7L2K0 433 aa8.72□□□□□ -1.01
SNORA40.4-201ENST00000390971 UHMK1Q8TAS1 419 aaKnown RBP8.72□□□□□ -1.01
SNORA40.4-201ENST00000390971 SLC7A14Q8TBB6 771 aa8.72□□□□□ -1.01
SNORA40.4-201ENST00000390971 TOE1Q96GM8 510 aaKnown RBP8.72□□□□□ -1.01
SNORA40.4-201ENST00000390971 NCOA5Q9HCD5 579 aaKnown RBP8.72□□□□□ -1.01
SNORA40.4-201ENST00000390971 CATSPERZQ9NTU4 200 aa8.72□□□□□ -1.01
SNORA40.4-201ENST00000390971 SFMBT1Q9UHJ3 866 aa8.72□□□□□ -1.01
SNORA40.4-201ENST00000390971 DSEQ9UL01 958 aa8.72□□□□□ -1.01
SNORA40.4-201ENST00000390971 SLC27A2O14975 620 aa8.71□□□□□ -1.02
SNORA40.4-201ENST00000390971 C8BP07358 591 aa8.71□□□□□ -1.02
SNORA40.4-201ENST00000390971 ST5P78524 1137 aa8.71□□□□□ -1.02
SNORA40.4-201ENST00000390971 ZC3H7AQ8IWR0 971 aaKnown RBP8.71□□□□□ -1.02
SNORA40.4-201ENST00000390971 FNIP1Q8TF40 1166 aa8.71□□□□□ -1.02
SNORA40.4-201ENST00000390971 NKRFO15226 690 aaKnown RBP eCLIP8.7□□□□□ -1.02
SNORA40.4-201ENST00000390971 SRGAP2CP0DJJ0 459 aa8.7□□□□□ -1.02
SNORA40.4-201ENST00000390971 FAM47CQ5HY64 1035 aa8.7□□□□□ -1.02
SNORA40.4-201ENST00000390971 FAM26EQ8N5C1 309 aa8.7□□□□□ -1.02
SNORA40.4-201ENST00000390971 RNPC3Q96LT9 517 aaKnown RBP8.7□□□□□ -1.02
SNORA40.4-201ENST00000390971 KANSL2Q9H9L4 492 aa8.7□□□□□ -1.02
SNORA40.4-201ENST00000390971 TMEM260Q9NX78 707 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms