RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 TCHHQ07283 1943 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 ECM2O94769 699 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 WDR93Q6P2C0 686 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 PACS2Q86VP3 889 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 PIGSQ96S52 555 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 NYXQ9GZU5 481 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 LACRTQ9GZZ8 138 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 EPB41L4AQ9HCS5 686 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 INTS13Q9NVM9 706 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 CCDC160A6NGH7 325 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 CARSP49589 748 aaKnown RBP14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 SESN3P58005 492 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 PABPC4Q13310 644 aaKnown RBP eCLIP14.36□□□□□ -0.116e-8■■■■■ 34.2
TRAPPC9-201ENST00000389328 PRR16Q569H4 304 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 CAPN12Q6ZSI9 719 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 CXorf56Q9H5V9 222 aa14.36□□□□□ -0.11
TRAPPC9-201ENST00000389328 CLGNO14967 610 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 GFPT2O94808 682 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 TBX2Q13207 712 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 TSNAXIP1Q2TAA8 658 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 RNF10Q8N5U6 811 aaKnown RBP14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 ZIM3Q96PE6 472 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 NAP1L4Q99733 375 aaKnown RBP14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 PARP2Q9UGN5 583 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 SUN1O94901 812 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 MESDQ14696 234 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 EZH2Q15910 746 aaKnown RBP14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 HHATQ5VTY9 493 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 TRAPPC11Q7Z392 1133 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 SRBD1Q8N5C6 995 aaKnown RBP14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 PBKQ96KB5 322 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 ISCA1Q9BUE6 129 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 PSTPIP2Q9H939 334 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 DMGDHQ9UI17 866 aaKnown RBP14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 SALL1Q9NSC2 1324 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 FGGP02679 453 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 LSP1P33241 339 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 FAM83BQ5T0W9 1011 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 OTUD6AQ7L8S5 288 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 ZNF473Q8WTR7 871 aaKnown RBP14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 RAB21Q9UL25 225 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 POTEMA6NI47 508 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 CLIC2O15247 247 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 SRGNP10124 158 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 CUL1Q13616 776 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 CCDC38Q502W7 563 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 TPH2Q8IWU9 490 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 OR2W6PQ8NHA6 318 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 MCUR1Q96AQ8 359 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 ARL8AQ96BM9 186 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 PHF20Q9BVI0 1012 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 USTQ9Y2C2 406 aa14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.35□□□□□ -0.11
TRAPPC9-201ENST00000389328 KDM3AQ9Y4C1 1321 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 UFL1O94874 794 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 PLEKP08567 350 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 PPP2R5EQ16537 467 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 ARMC9Q7Z3E5 817 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 NEK9Q8TD19 979 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 SMC6Q96SB8 1091 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 BZW2Q9Y6E2 419 aaKnown RBP14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 MAP2K7O14733 419 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 BCRP11274 1271 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 BMP6P22004 513 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 LRRC63Q05C16 580 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 STK4Q13043 487 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 HVCN1Q96D96 273 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 EPN3Q9H201 632 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 STK17AQ9UEE5 414 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 SNX24Q9Y343 169 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 LRRN2O75325 713 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 MMEP08473 750 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 MDH1P40925 334 aaKnown RBP14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 PTPRUQ92729 1446 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 EMILIN3Q9NT22 766 aa14.34□□□□□ -0.11
TRAPPC9-201ENST00000389328 CDHR2Q9BYE9 1310 aa14.33□□□□□ -0.11
TRAPPC9-201ENST00000389328 THAP12O43422 761 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 AFPP02771 609 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 ADCY8P40145 1251 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 USP37Q86T82 979 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 CCDC13Q8IYE1 715 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 TAF1DQ9H5J8 278 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 HDAC9Q9UKV0 1011 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 ARHGEF28Q8N1W1 1705 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 KIDINS220Q9ULH0 1771 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 MEIS1O00470 390 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 GAS8O95995 478 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 PPP2R2AP63151 447 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 FYB2Q5VWT5 728 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 SUSD4Q5VX71 490 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 VPS52Q8N1B4 723 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 PIGBQ92521 554 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 RNPC3Q96LT9 517 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 EHD4Q9H223 541 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 CNOT10Q9H9A5 744 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 FBXL5Q9UKA1 691 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 DDX39AO00148 427 aaKnown RBP14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 MECOMQ03112 1051 aa14.33□□□□□ -0.12
TRAPPC9-201ENST00000389328 PARP9Q8IXQ6 854 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms