RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 hCG_1984214I3L0E3 225 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 SPATA31C1P0DKV0 1188 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 MYCLP12524 364 aaPredicted RBP11.36□□□□□ -0.59
LTN1-203ENST00000389195 TNNT1P13805 278 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
LTN1-203ENST00000389195 ARSHQ5FYA8 562 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 CDKAL1Q5VV42 579 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 TOGARAM2Q6ZUX3 1019 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 ZNF713Q8N859 430 aaPredicted RBP11.36□□□□□ -0.59
LTN1-203ENST00000389195 TC2NQ8N9U0 490 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 GIMAP8Q8ND71 665 aaPredicted RBP11.36□□□□□ -0.59
LTN1-203ENST00000389195 AK8Q96MA6 479 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 DACH1Q9UI36 760 aa11.36□□□□□ -0.59
LTN1-203ENST00000389195 GCOM1H8Y6P7 765 aaPredicted RBP11.35□□□□□ -0.59
LTN1-203ENST00000389195 TBC1D12O60347 775 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 POLR2MP0CAP2 368 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 TCP11X2Q5H9J9 407 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 CSGALNACT2Q8N6G5 542 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 BANK1Q8NDB2 785 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 CHURC1Q8WUH1 139 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 TAAR1Q96RJ0 339 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 SYT17Q9BSW7 474 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 BHMT2Q9H2M3 363 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 RANBP17Q9H2T7 1088 aaKnown RBP11.35□□□□□ -0.59
LTN1-203ENST00000389195 SPTLC3Q9NUV7 552 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.35□□□□□ -0.59
LTN1-203ENST00000389195 V9GYY5 206 aaPredicted RBP11.35□□□□□ -0.59
LTN1-203ENST00000389195 IGLV3-22A0A075B6J6 115 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 UQCRHLA0A096LP55 91 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 RHOBTB3O94955 611 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 UQCRHP07919 91 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 PLA2G4BP0C869 781 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 ITGB5P18084 799 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 UBXN1Q04323 297 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 SPECC1LQ69YQ0 1117 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 PPP1R18Q6NYC8 613 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 GPBP1Q86WP2 473 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 RWDD2AQ9UIY3 292 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 KIF13BQ9NQT8 1826 aa11.35□□□□□ -0.59
LTN1-203ENST00000389195 A0A1B0GTH6 734 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 KRT18P05783 430 aaKnown RBP11.34□□□□□ -0.59
LTN1-203ENST00000389195 PTPRAP18433 802 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 SREBF1P36956 1147 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 FSTL1Q12841 308 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 CLMNQ96JQ2 1002 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 SLF1Q9BQI6 1058 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 MORC2Q9Y6X9 1032 aaPredicted RBP11.34□□□□□ -0.59
LTN1-203ENST00000389195 LAMA3Q16787 3333 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 USP11P51784 963 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 RPS6P62753 249 aaKnown RBP11.34□□□□□ -0.59
LTN1-203ENST00000389195 TNFAIP1Q13829 316 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 HERC4Q5GLZ8 1057 aaPredicted RBP11.34□□□□□ -0.59
LTN1-203ENST00000389195 FKBP1CQ5VVH2 108 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 TTI2Q6NXR4 508 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.34□□□□□ -0.59
LTN1-203ENST00000389195 CCAR2Q8N163 923 aaKnown RBP11.34□□□□□ -0.59
LTN1-203ENST00000389195 CLEC4DQ8WXI8 215 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 DNAJC19Q96DA6 116 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 DYDC2Q96IM9 177 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 C7orf25Q9BPX7 421 aa11.34□□□□□ -0.59
LTN1-203ENST00000389195 FANCGO15287 622 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 ATP9AO75110 1047 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 COPB1P53618 953 aaKnown RBP11.33□□□□□ -0.6
LTN1-203ENST00000389195 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
LTN1-203ENST00000389195 PDIA5Q14554 519 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 PRPF38AQ8NAV1 312 aaKnown RBP11.33□□□□□ -0.6
LTN1-203ENST00000389195 RUSC1Q9BVN2 902 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 SPON1Q9HCB6 807 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 PANK4Q9NVE7 773 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 RIOK3O14730 519 aaKnown RBP11.33□□□□□ -0.6
LTN1-203ENST00000389195 CTNND1O60716 968 aaKnown RBP11.33□□□□□ -0.6
LTN1-203ENST00000389195 GYPCP04921 128 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 POTEJP0CG39 1038 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 LMNB1P20700 586 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 MAP3K10Q02779 954 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 COASYQ13057 564 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 LRCH2Q5VUJ6 765 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 TMEM139Q8IV31 216 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 EIF2AK1Q9BQI3 630 aaKnown RBP11.33□□□□□ -0.6
LTN1-203ENST00000389195 RAB34Q9BZG1 259 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 RMND1Q9NWS8 449 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 VAV3Q9UKW4 847 aa11.33□□□□□ -0.6
LTN1-203ENST00000389195 HTTP42858 3142 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 PSMA7O14818 248 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 CYP11B2P19099 503 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 MRPS9P82933 396 aaKnown RBP11.32□□□□□ -0.6
LTN1-203ENST00000389195 TMEM119Q4V9L6 283 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 PPP4R3BQ5MIZ7 849 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 TREML2Q5T2D2 321 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 P2RX5Q93086 422 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 VPS33BQ9H267 617 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 PICK1Q9NRD5 415 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 AGPAT5Q9NUQ2 364 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 FEM1BQ9UK73 627 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 SAMM50Q9Y512 469 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 CBFA2T2O43439 604 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 BACE1P56817 501 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 BAATQ14032 418 aaPredicted RBP11.32□□□□□ -0.6
LTN1-203ENST00000389195 C9orf131Q5VYM1 1079 aa11.32□□□□□ -0.6
LTN1-203ENST00000389195 SYT10Q6XYQ8 523 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms